UniGene Name: sp_v3.0_unigene65687
Length: 202 nt
UniGene Fasta |
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>sp_v3.0_unigene65687
G |
Ace file of the UniGene sp_v3.0_unigene65687 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | Os02g0203000 protein n=2 Tax=Oryza sativa RepID=Q0E2Y8_ORYSJ | - | - | 1.0e-12 | 82% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 94% |
Sma3 | Transcription factor HY5 | - | - | 2.378e-14 | - |
Source | Gene names |
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Sma3 | ASTRAY; At3g17609; At5g11260; BZIP56; F2I11_150; GSVIVT00032620001; HY5; HYH; MKP6.27; OJ1135_F06.14; OSJNBa0089K24.18; Os01g0174000; Os02g0203000; Os06g0601500; OsI_00597; OsI_00600; OsI_06291; OsI_23604; OsJ_00568; OsJ_05807; Ot01g03790; P0457B11.24; P0 |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | double-stranded DNA binding | GO:0003690 | Molecular Function | 0.0 | - |
Sma3 | sequence-specific DNA binding transcription factor activity | GO:0003700 | Molecular Function | 0.0 | - |
Sma3 | sugar binding | GO:0005529 | Molecular Function | 0.0 | - |
Sma3 | zinc ion binding | GO:0008270 | Molecular Function | 0.0 | - |
Sma3 | electron carrier activity | GO:0009055 | Molecular Function | 0.0 | - |
Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
Sma3 | sequence-specific DNA binding | GO:0043565 | Molecular Function | 0.0 | - |
Sma3 | protein dimerization activity | GO:0046983 | Molecular Function | 0.0 | - |
Sma3 | regulation of transcription, DNA-dependent | GO:0006355 | Biological Process | 0.0 | - |
Sma3 | red, far-red light phototransduction | GO:0009585 | Biological Process | 0.0 | - |
Sma3 | response to abscisic acid stimulus | GO:0009737 | Biological Process | 0.0 | - |
Sma3 | gibberellic acid mediated signaling pathway | GO:0009740 | Biological Process | 0.0 | - |
Sma3 | red or far-red light signaling pathway | GO:0010017 | Biological Process | 0.0 | - |
Sma3 | regulation of photomorphogenesis | GO:0010099 | Biological Process | 0.0 | - |
Sma3 | response to red light | GO:0010114 | Biological Process | 0.0 | - |
Sma3 | response to far red light | GO:0010218 | Biological Process | 0.0 | - |
Sma3 | response to UV-B | GO:0010224 | Biological Process | 0.0 | - |
Sma3 | positive regulation of anthocyanin metabolic process | GO:0031539 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Legume lectin domain | IPR001220 | - | 0.0 | - |
Sma3 | Oxidoreductase FAD/NAD(P)-binding | IPR001433 | - | 0.0 | - |
Sma3 | cAMP response element binding (CREB) protein | IPR001630 | - | 0.0 | - |
Sma3 | NADH:cytochrome b5 reductase (CBR) | IPR001834 | - | 0.0 | - |
Sma3 | Zinc finger, RING-type | IPR001841 | - | 0.0 | - |
Sma3 | Basic-leucine zipper domain | IPR004827 | - | 0.0 | - |
Sma3 | Oxidoreductase, FAD-binding domain | IPR008333 | - | 0.0 | - |
Sma3 | bZIP transcription factor, bZIP-1 | IPR011616 | - | 0.0 | - |
Sma3 | Basic leucine zipper | IPR011700 | - | 0.0 | - |
Sma3 | Concanavalin A-like lectin/glucanase, subgroup | IPR013320 | - | 0.0 | - |
Sma3 | Ferredoxin reductase-type FAD-binding domain | IPR017927 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT5G11260.1 | HY5, TED 5 Basic-leucine zipper (bZIP) transcription factor family protein chr5:3593583-3594800 REVERSE LENGTH=168 | 2.0e-14 | 79% |
RefSeq | Arabidopsis thaliana | NP_568246.1 | transcription factor HY5 [Arabidopsis thaliana] | 2.0e-14 | 79% |
RefSeq | Populus trichocarpa | XP_002324289.1 | predicted protein [Populus trichocarpa] | 5.0e-15 | 82% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A9NZF5
Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 33 aas, your sequence is shorter than subject: 67 - 163
Fln protein:
E
Protein Length:
68
Fln nts:
G
Fln Alignment:
GFXCM5X02FPUH2___RLLRNRVSAQQARERKKAYLNELETKAKELQQRNSELEE
A9NZF5_______________RLLRNRVSAQQARERKKAYLNELETKANELQQKNSELEE
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain