UniGene Name: sp_v3.0_unigene64359
Length: 223 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
UniGene Fasta (sense) |
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>sp_v3.0_unigene64359
A |
Ace file of the UniGene sp_v3.0_unigene64359 (antisense) |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Monodehydroascorbate reductase n=1 Tax=Malus x domestica RepID=C0LQ98_MALDO | - | - | 3.0e-20 | 69% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 80% |
Sma3 | Monodehydroascorbate reductase | - | - | 3.993e-40 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Monodehydroascorbate reductase (NADH). | EC:1.6.5.4 | - | 5.491e-30 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Ascorbate and aldarate metabolism | 00053 | 5.491e-30 | % | |
Sma3 | Metabolic pathways | 01100 | 5.491e-30 | % |
Source | Gene names |
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Sma3 | AFRR; AT3G52880; At3g27820; At3g52880; At5g03630; BO-MDAR 2; F17C15_50; F8J2_50; GSVIVT00020720001; GSVIVT00021644001; K16N12.2; MDAR; MDHAR1; Mdhar1; Mdhar2; Mdhar3; OJ1150_A11.25; OJ1155_H10.27; Os08g0557600; Os09g0567300; OsI_08630; OsI_30244; OsI_3243 |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | peroxisomal membrane | GO:0005778 | Cellular Component | 0.0 | - |
Sma3 | peroxisomal matrix | GO:0005782 | Cellular Component | 0.0 | - |
Sma3 | cytosol | GO:0005829 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | chloroplast envelope | GO:0009941 | Cellular Component | 0.0 | - |
Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
Sma3 | monodehydroascorbate reductase (NADH) activity | GO:0016656 | Molecular Function | 0.0 | - |
Sma3 | flavin adenine dinucleotide binding | GO:0050660 | Molecular Function | 0.0 | - |
Sma3 | response to salt stress | GO:0009651 | Biological Process | 0.0 | - |
Sma3 | hydrogen peroxide catabolic process | GO:0042744 | Biological Process | 0.0 | - |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Pyridine nucleotide-disulphide oxidoreductase, class-II | IPR000103 | - | 0.0 | - |
Sma3 | Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain | IPR001327 | - | 0.0 | - |
Sma3 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | IPR013027 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT5G03630.1 | ATMDAR2 Pyridine nucleotide-disulphide oxidoreductase family protein chr5:922378-924616 REVERSE LENGTH=435 | 8.0e-25 | 66% |
RefSeq | Arabidopsis thaliana | NP_568125.1 | monodehydroascorbate reductase (NADH) [Arabidopsis thaliana] | 1.0e-24 | 66% |
RefSeq | Populus trichocarpa | XP_002326252.1 | predicted protein [Populus trichocarpa] | 3.0e-24 | 65% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: C0PQT8
Fln msg: Distance to subject end: 194 aas, your sequence is shorter than subject: 74 - 434
Fln protein:
A
Protein Length:
75
Fln nts:
A
Fln Alignment:
G5KS2UX02HC58C___AVVVGGGYIGLELAAVLKINKYKVKMVCPEPGFMPRLFTADMASFYEGYYKGKGVDIIKGR-AAGFSTDEHGN
C0PQT8_______________AVIVGGGYIGLELAAVLRINKYKVKMVYPEPWCMPRLFTADIAAFYEGYYRGKGVEIIKGTVATGFVTDEHEN
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain