SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene63871

Length: 172 nt

UniGene Fasta

>sp_v3.0_unigene63871
AATGTCTTCTAGTGCGTGCTTGTATGGGGATTGGTGAGGGAGTTGCTATGCCTGCTATGAGCAATCTACTGTCTAGGTGGGTTCCTGTTGAAGAAAGGAGCAGATCATTGGCATTTGTGTACAGTGGGATGTATCTTGGTTCAAGTGACAGGATTGTCCTTGTCTCCAATGC

Ace file of the UniGene sp_v3.0_unigene63871

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Na+/Pi transporter [Eutrema halophilum]	-	-	1.0e-14	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%

Source	Gene names
Sma3	ANTR1; ANTR2; A_IG005I10_nn; At2g29650; At4g00370; CHLREDRAFT_130070; F5I10.7; GSVIVT00024146001; GSVIVT00026884001; MFT11; OJ1003_C09.34; OSJNBa0036E02.3; Os01g0279700; Os09g0570400; OsI_01403; OsI_32467; OsJ_01311; OsJ_30419; P0003H10.9; PHYPADRAFT_2060

Source	GOs	Term	Type	Identity
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	plastid inner membrane	GO:0009528	Cellular Component	-
Sma3	thylakoid	GO:0009579	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	inorganic phosphate transmembrane transporter activity	GO:0005315	Molecular Function	-
Sma3	sugar:hydrogen symporter activity	GO:0005351	Molecular Function	-
Sma3	symporter activity	GO:0015293	Molecular Function	-
Sma3	inorganic diphosphate transmembrane transporter activity	GO:0030504	Molecular Function	-
Sma3	sodium ion binding	GO:0031402	Molecular Function	-
Sma3	sodium ion transport	GO:0006814	Biological Process	-
Sma3	carbohydrate transport	GO:0008643	Biological Process	-
Sma3	response to nematode	GO:0009624	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Major facilitator superfamily	IPR011701	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G29650.1	" ANTR1, PHT4;1 phosphate transporter 4;1 chr2:12673685-12676003 REVERSE LENGTH=512"	8.0e-20	82%
RefSeq	Arabidopsis thaliana	NP_850136.1	sodium-dependent phosphate transport protein 1 [Arabidopsis thaliana]	5.0e-20	82%
RefSeq	Populus trichocarpa	XP_002313388.1	predicted protein, partial [Populus trichocarpa]	2.0e-21	86%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKH1

Fln msg: Distance to subject end: 329 aas, your sequence is shorter than subject: 56 - 671

Fln protein: CLLVRACMGIGEGVAMPAMSNLLSRWVPVEERSRSLAFVYSGMYLGSSDRIVLVSN

Protein Length: 57

Fln nts: AATGTCTTCTAGTGCGTGCTTGTATGGGGATTGGTGAGGGAGTTGCTATGCCTGCTATGAGCAATCTACTGTCTAGGTGGGTTCCTGTTGAAGAAAGGAGCAGATCATTGGCATTTGTGTACAGTGGGATGTATCTTGGTTCAAGTGACAGGATTGTCCTTGTCTCCAATGC

Fln Alignment:

G5KS2UX02J1T9G___LLVRACMGIGEGVAMPAMSNLLSRWVPVEERSRSLAFVYSGMYLGS
B8LKH1_______________LLVRAFMGIGEGVAMPAMNNILSRWIPAKERSRSLALVYSGMYLGS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain