SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene63587

Length: 165 nt

UniGene Fasta

>sp_v3.0_unigene63587
AATGTAATTTAAATACATATTTGCATAGAAGAGGAAGGAAATCTTGAGAATCTTGCTGAATTTGCTCCTGGATTTCGGCTGCGATCAAGAGGCAATGTCTTAGTATCCTCCAATCAGCAATGTGAGGTCAACATTAAAGATGCTGCAGTTGAATTAGGCCCATTC

Ace file of the UniGene sp_v3.0_unigene63587

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	1.0e-15	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%

Source	GOs	Term	Type	e value	Identity
Sma3	structural molecule activity	GO:0005198	Molecular Function	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Plastid lipid-associated protein/fibrillin conserved domain	IPR006843	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NTA6

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 41 aas, your sequence is shorter than subject: 55 - 418

Fln protein: NVI*IHICIEEEGNLENLAEFAPGFRLRSRGNVLVSSNQQCEVNIKDAAVELGPF

Protein Length: 56

Fln nts: AATGTAATTTAAATACATATTTGCATAGAAGAGGAAGGAAATCTTGAGAATCTTGCTGAATTTGCTCCTGGATTTCGGCTGCGATCAAGAGGCAATGTCTTAGTATCCTCCAATCAGCAATGTGAGGTCAACATTAAAGATGCTGCAGTTGAATTAGGCCCATTC

Fln Alignment:

G5KS2UX02I01EM___IEEEGNLENLAEFAPGFRLRSRGNVLVSSNQQCEVNIKDAAVELGP
A9NTA6_______________VKDTGNLENLAEFAPGFRLRSRGNVIVSSSQQCEVNIKDAAVELGP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain