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UniGene Name: sp_v3.0_unigene63549
Length: 177 nt
 UniGene Fasta
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| >sp_v3.0_unigene63549
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Ace file of the UniGene sp_v3.0_unigene63549
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Unassigned protein | - | - | 0.0 | - |
| FL-Next | sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress). | - | - | 0.0 | 77% |
| Sma3 | Gcn4-complementing protein, putative | - | - | 2.563e-08 | - |
| Source | Gene names |
|---|---|
| Sma3 | AGD1; AGD2; AGD3; AGD4; At1g10870; At1g60860; At5g13300; At5g61980; B1250G12.27; F23C21.2; GCP1; GSVIVT00006190001; GSVIVT00018033001; GSVIVT00021248001; K22G18.9; OJ1643_A10.2; Os02g0632500; Os08g0537600; Os09g0510700; OsI_08174; OsI_30058; OsI_31998; Os |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
| Sma3 | endosome | GO:0005768 | Cellular Component | 0.0 | - |
| Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
| Sma3 | trans-Golgi network transport vesicle | GO:0030140 | Cellular Component | 0.0 | - |
| Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
| Sma3 | ARF GTPase activator activity | GO:0008060 | Molecular Function | 0.0 | - |
| Sma3 | zinc ion binding | GO:0008270 | Molecular Function | 0.0 | - |
| Sma3 | phosphatidylinositol binding | GO:0035091 | Molecular Function | 0.0 | - |
| Sma3 | transport | GO:0006810 | Biological Process | 0.0 | - |
| Sma3 | response to auxin stimulus | GO:0009733 | Biological Process | 0.0 | - |
| Sma3 | leaf morphogenesis | GO:0009965 | Biological Process | 0.0 | - |
| Sma3 | xylem and phloem pattern formation | GO:0010051 | Biological Process | 0.0 | - |
| Sma3 | phloem or xylem histogenesis | GO:0010087 | Biological Process | 0.0 | - |
| Sma3 | regulation of ARF GTPase activity | GO:0032312 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Protein kinase, catalytic domain | IPR000719 | - | 0.0 | - |
| Sma3 | Arf GTPase activating protein | IPR001164 | - | 0.0 | - |
| Sma3 | Pleckstrin homology domain | IPR001849 | - | 0.0 | - |
| Sma3 | Ankyrin repeat | IPR002110 | - | 0.0 | - |
| Sma3 | BAR domain | IPR004148 | - | 0.0 | - |
| Sma3 | Pleckstrin homology-like domain | IPR011993 | - | 0.0 | - |
| Sma3 | IPR017442 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT5G13300.1 | SFC, VAN3, AGD3 ARF GTPase-activating protein chr5:4255923-4262018 REVERSE LENGTH=827 | 1.0e-24 | 77% |
| RefSeq | Arabidopsis thaliana | NP_196834.3 | ADP-ribosylation factor GTPase-activating protein AGD3 [Arabidopsis thaliana] | 2.0e-24 | 77% |
| RefSeq | Populus trichocarpa | XP_002299350.1 | predicted protein [Populus trichocarpa] | 8.0e-25 | 77% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: Q5W7F2
Fln msg: Distance to subject end: 704 aas, your sequence is shorter than subject: 58 - 827
Fln protein:
D
Protein Length:
59
Fln nts:
A
Fln Alignment:
G5KS2UX02I7IVD___DDPISISVGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLMEFETVDLQDVKEVRK
Q5W7F2_______________NDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHILNDRLLQFANMDLHEVKEARK
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
