SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene63510

Length: 152 nt

UniGene Fasta

>sp_v3.0_unigene63510
AATGTAGACATTATTAAGAAAACATATAACAACGGTGTTATTCCTCGTCCAGTATTTAACAATGCTGCTCAGGCCCTGGAATCATAGAGTTCTTTTGGGAATGTATGAAACCCGGGGGTGGGAAAGAGCCCAAAGGAGAGATCCTTGAACTT

Ace file of the UniGene sp_v3.0_unigene63510

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
FL-Next	sp=Superoxide dismutase; Pinus pinaster (Maritime pine).	-	-	0.0	65%

Source	GOs	Term	Type	Identity
Sma3	superoxide dismutase activity	GO:0004784	Molecular Function	-
Sma3	metal ion binding	GO:0046872	Molecular Function	-
Sma3	superoxide metabolic process	GO:0006801	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Manganese/iron superoxide dismutase	IPR001189	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q6QJL0

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 103 aas, your sequence is shorter than subject: 36 - 249

Fln protein: NVDIIKKTYNNGVIPRPVFNNAAQALES*SSFGNV*

Protein Length: 37

Fln nts: AATGTAGACATTATTAAGAAAACATATAACAACGGTGTTATTCCTCGTCCAGTATTTAACAATGCTGCTCAGGCCCTGGAATCATAGAGTTCTTTTGGGAATGTATGAAACCCGGGGGTGGGAAAGAGCCCAAAGGAGAGATCCTTGAACTT

Fln Alignment:

G5KS2UX02HL0JB___DIIKKTYNNGVIPRPVFNNAAQALES*SSFGNV*NPGVGKSPK
Q6QJL0_______________DIIKKTYNNGD-PRPVFNNAAQAWNH-EFFWECMKPGGGKEPK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain