SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene62335

Length: 165 nt

UniGene Fasta

>sp_v3.0_unigene62335
AATGTCCAGGCCAATCCTCATATTGCACCCTTGTTGAGACTTAAGGAGCTTGTGAGAGTATATGGAGGTGATTTCGCGGCCAAGCTAGCCCATTTACTTGAGATGGAGGTTAAGCACAGATGCAACCAAATACTGGAGCTGGGCTTTCCCTTGGGTGGTATTGCT

Ace file of the UniGene sp_v3.0_unigene62335

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Triacylglycerol lipase SDP1 n=2 Tax=Arabidopsis RepID=SDP1_ARATH	-	-	2.0e-20	88%
FL-Next	sp=Triacylglycerol lipase SDP1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	88%

Source	Gene names
Sma3	At3g57140; At3g57140/F24I3_220; At5g04040; F24I3.220; F8F6_250; GSVIVT00025319001; LOC_Os03g59620; OSJNBa0028F23.4; OSJNBb0033J23.4; Os01g0762000; Os03g0810900; OsI_03832; OsI_14019; OsJ_03542; OsJ_13065; P0460E08.35; P0512C01.31; PHYPADRAFT_120017; PHYPA

Source	GOs	Term	Type	Identity
Sma3	monolayer-surrounded lipid storage body	GO:0012511	Cellular Component	-
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	-
Sma3	GTP binding	GO:0005525	Molecular Function	-
Sma3	hydrolase activity	GO:0016787	Molecular Function	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	-
Sma3	triglyceride catabolic process	GO:0019433	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Patatin/Phospholipase A2-related	IPR002641	-	0.0	-
Sma3	Small GTPase superfamily, ARF/SAR type	IPR006689	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G04040.1	SDP1 Patatin-like phospholipase family protein chr5:1090346-1093003 FORWARD LENGTH=825	1.0e-26	88%
RefSeq	Arabidopsis thaliana	NP_196024.1	triacylglycerol lipase SDP1 [Arabidopsis thaliana]	2.0e-26	88%
RefSeq	Populus trichocarpa	XP_002308909.1	predicted protein [Populus trichocarpa]	3.0e-26	86%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9LZA6

Fln msg: Distance to subject end: 324 aas, your sequence is shorter than subject: 55 - 825

Fln protein: NVQANPHIAPLLRLKELVRVYGGDFAAKLAHLLEMEVKHRCNQILELGFPLGGIA

Protein Length: 56

Fln nts: AATGTCCAGGCCAATCCTCATATTGCACCCTTGTTGAGACTTAAGGAGCTTGTGAGAGTATATGGAGGTGATTTCGCGGCCAAGCTAGCCCATTTACTTGAGATGGAGGTTAAGCACAGATGCAACCAAATACTGGAGCTGGGCTTTCCCTTGGGTGGTATTGCT

Fln Alignment:

G5KS2UX02JUTK8___QANPHIAPLLRLKELVRVYGGDFAAKLAHLLEMEVKHRCNQILELGFPLGGIA
Q9LZA6_______________QANPHIAPLLRLKDLVRAYGGRFAAKLAHLVEMEVKHRCNQVLELGFPLGGLA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain