SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene61957

Length: 190 nt

UniGene Fasta

>sp_v3.0_unigene61957
AATGTGAAATGATGTTTGCACTCTCTTGGCATTGGTTTCTAAGGATGGTAGTATTGCAGCTTCATTGAATACATCCGAGGCTCCTCCTTTAGTGCTGCAACTTTCAGAACTATTACCATATTGTGGACTTTCATATGTAGGACTTATCACTGGAAGGGATGTGGAAGTTAATCCTTTTTGGAATGATGAT

Ace file of the UniGene sp_v3.0_unigene61957

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	2.0e-20	92%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphotransferase system, HPr serine phosphorylation site	IPR002114	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQH8

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 318 aas, your sequence is shorter than subject: 63 - 646

Fln protein: M*NDVCTLLALVSKDGSIAASLNTSEAPPLVLQLSELLPYCGLSYVGLITGRDVEVNPFWNDD

Protein Length: 64

Fln nts: AATGTGAAATGATGTTTGCACTCTCTTGGCATTGGTTTCTAAGGATGGTAGTATTGCAGCTTCATTGAATACATCCGAGGCTCCTCCTTTAGTGCTGCAACTTTCAGAACTATTACCATATTGTGGACTTTCATATGTAGGACTTATCACTGGAAGGGATGTGGAAGTTAATCCTTTTTGGAATGATGAT

Fln Alignment:

G5KS2UX02J1FNX___LLALVSKDGSIAASLNTSEAPPLVLQLSELLPYCGLSYVGLITGRDVEV-NPFWNDD
B8LQH8_______________LLALVSKDGSIAASLNTSKAPSLVLQLSELLPYCGLSYVGLITGRDVEVLNNFWNDD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain