SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene61567

Length: 230 nt

UniGene Fasta

>sp_v3.0_unigene61567
AATGTAATTATTGAAAATCCCTGCTGGTACTTTTGATTTTTCTTAAATCCGATGGCAATGGCGGACTTATTATAGATTCTGGAACGACTGTCACGTATCTGGAACAGACTTTGGTTTATGATCTTGTGAAGAAAGCCTTGATGTCAGTGATTCATCTTCCACAGGCCGATGGGTCTAGCATCGGACTGGACCTCTGTTATCAACACCACTCTGGTTCTTCAATTCCGAAA

Ace file of the UniGene sp_v3.0_unigene61567

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RecName: Full=Aspartic proteinase nepenthesin-2; AltName: Full=Nepenthesin-II; Flags: Precursor dbj\|BAD07475.1\| aspartic proteinase nepenthesin II [Nepenthes gracilis]	-	-	9.0e-08	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	70%

Source	GOs	Term	Type	e value	Identity
Sma3	aspartic-type endopeptidase activity	GO:0004190	Molecular Function	0.0	-
Sma3	proteolysis	GO:0006508	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Peptidase A1	IPR001461	-	-
Sma3	Peptidase aspartic, active site	IPR001969	-	-
Sma3	Peptidase aspartic, catalytic	IPR009007	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G03200.1	Eukaryotic aspartyl protease family protein chr2:966506-967891 REVERSE LENGTH=461	3.0e-11	51%
RefSeq	Arabidopsis thaliana	NP_565298.2	aspartyl protease-like protein [Arabidopsis thaliana]	4.0e-11	51%
RefSeq	Populus trichocarpa	XP_002329464.1	predicted protein, partial [Populus trichocarpa]	1.0e-13	53%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NXW9

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 71 aas, your sequence is shorter than subject: 76 - 460

Fln protein: CNY*KSLLVLLIFLKSDGNGGLIIDSGTTVTYLEQTLVYDLVKKALMSVIHLPQADGSSIGLDLCYQHHSGSSIPK

Protein Length: 77

Fln nts: AATGTAATTATTGAAAATCCCTGCTGGTACTTTTGATTTTTCTTAAATCCGATGGCAATGGCGGACTTATTATAGATTCTGGAACGACTGTCACGTATCTGGAACAGACTTTGGTTTATGATCTTGTGAAGAAAGCCTTGATGTCAGTGATTCATCTTCCACAGGCCGATGGGTCTAGCATCGGACTGGACCTCTGTTATCAACACCACTCTGGTTCTTCAATTCCGAAA

Fln Alignment:

G5KS2UX02FQZ5Q___LKSDGNGGLIIDSGTTVTYLEQTLVYDLVKKALMSVIHLPQADGSSIGLDLCYQHHSGSS
A9NXW9_______________LQLDGTGGVIIDSGTTVTYLEQS-GYDVVKKAVISSINLPQVDGSNIGLDLCFEPQSGSS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain