SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene61061

Length: 191 nt

UniGene Fasta

>sp_v3.0_unigene61061
AATGTCAATAAGTGGTGTCAGCTATATGGAGAGACATTTTTCTATTGGTATGGAACCCATCCAAGGCTGTATATTTCAGAGCCAGAGCTAATCAAGGAAGTTTTATCGAATAAATTTGGTTACTATGGAAAGGAGACACCCATGCCCTTTTTGCTGGCTTTGCTTGGGCGGGACTGGTTTTGTAGATCGAT

Ace file of the UniGene sp_v3.0_unigene61061

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cytochrome P450, family 709, subfamily B, polypeptide 1 [Arabidopsis thaliana] gb\|AAK32916.1\|AF367329_1 At2g46960/F14M4.21 [Arabidopsis thaliana] gb\|AAM10287.1\| At2g46960/F14M4.21 [Arabidopsis thaliana] gb\|AAC34227.2\| putative cytochrome P450 [Arabidopsis	-	-	2.0e-09	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%

Source	GOs	Term	Type	Identity
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G46960.2	CYP709B1 cytochrome P450, family 709, subfamily B, polypeptide 1 chr2:19292295-19294212 REVERSE LENGTH=519	2.0e-13	52%
RefSeq	Arabidopsis thaliana	NP_566092.1	cytochrome P450, family 709, subfamily B, polypeptide 1 [Arabidopsis thaliana]	3.0e-13	52%
RefSeq	Populus trichocarpa	XP_002325505.1	cytochrome P450 [Populus trichocarpa]	2.0e-11	50%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PQ33

Fln msg: Distance to subject end: 379 aas, your sequence is shorter than subject: 63 - 460

Fln protein: NVNKWCQLYGETFFYWYGTHPRLYISEPELIKEVLSNKFGYYGKETPMPFLLALLGRDWFCRS

Protein Length: 64

Fln nts: AATGTCAATAAGTGGTGTCAGCTATATGGAGAGACATTTTTCTATTGGTATGGAACCCATCCAAGGCTGTATATTTCAGAGCCAGAGCTAATCAAGGAAGTTTTATCGAATAAATTTGGTTACTATGGAAAGGAGACACCCATGCCCTTTTTGCTGGCTTTGCTTGGGCGGGACTGGTTTTGTAGATCGAT

Fln Alignment:

G5KS2UX02H1ELB___NKWCQLYGETFFYWYGTHPRLYISEPELIKEVLSNKFGYYGKETPMPFLLALLGR
C0PQ33_______________HKWCQIYGEPFFYWYGIHSRLYISEPELIKEVLSNKFGHYDKPTPRPILLALLGR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain