SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene59363

Length: 345 nt

UniGene Fasta

>sp_v3.0_unigene59363
TCAAGGTGTCAATAGAATATGGTTTGTGTGAGGTAATGAATTACATTGCGATAAGAACCCCACCTTCTTCACCAGACATTAGCTGGACAATTGACCGTTCTGAACTGGAAGCTATTTTACCAGCTGGAATGGTGGACCATTCTGTAGAGCCTGTATGGTCAGAGGTGAAGGTGTTGGAGTTTCAGTTTCTACATTTAAAAAGGNTGCAATTGTTCACGCAGTAGAATATTGTGCATATTCTCACTCTCAAAGATCCATATTTGGCTCTTCAACAAATGGGTTAAACACTGAAAAGTTTCACGTTTTGACAGAATCAGGCCAATCAGGGATTCGATTTGTAACAAG

Ace file of the UniGene sp_v3.0_unigene59363

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphoglycerate/bisphosphoglycerate mutase, active site	IPR001345	-	0.0	-
Sma3	Histidine phosphatase superfamily, clade-1	IPR013078	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G60450.1	Phosphoglycerate mutase family protein chr3:22340982-22342187 FORWARD LENGTH=274	6.0e-17	45%
RefSeq	Arabidopsis thaliana	NP_191604.1	phosphoglycerate mutase-like protein [Arabidopsis thaliana]	8.0e-17	45%
RefSeq	Populus trichocarpa	XP_002302509.1	predicted protein [Populus trichocarpa]	3.0e-21	54%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NPK4

Fln msg: Warning!, your query overlaps and the subject is separated, STOP codon was not found. Distance to subject end: 0 aas, your sequence is shorter than subject: 114 - 317

Fln protein: KVSIEYGLCEVMNYIAIRTPPSSPDISWTIDRSELEAILPAGMVDHSVExxxxxxxGVGVSVSTFKKDAIVHAVEYCAYSHSQRSIFGSSTNGLNTEKFHVLTESGQSGIRFVT

Protein Length: 115

Fln nts: TCAAGGTGTCAATAGAATATGGTTTGTGTGAGGTAATGAATTACATTGCGATAAGAACCCCACCTTCTTCACCAGACATTAGCTGGACAATTGACCGTTCTGAACTGGAAGCTATTTTACCAGCTGGAATGGTGGACCATTCTGTAGAGxxxxxxxxxxxxxxxxxxxxxGGTGTTGGAGTTTCAGTTTCTACATTTAAAAAGGaTGCAATTGTTCACGCAGTAGAATATTGTGCATATTCTCACTCTCAAAGATCCATATTTGGCTCTTCAACAAATGGGTTAAACACTGAAAAGTTTCACGTTTTGACAGAATCAGGCCAATCAGGGATTCGATTTGTAACAAG

Fln Alignment:

F7JJN6E01AK43Q___KVSIEYGLCEVMNYIAIRTPPSSPDISWTIDRSELEAILPAGMVDHSVEPVWSEVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCMVRGEGVGVSVSTFKKDAIVHAVEYCAYSHSQRSIFGSSTNGLNTEKFHVLTESGQSGIRF
A9NPK4_______________KVSIEYGLCEVMNQFAIRTPPSSPDISWTLDRSELEAILPAGTMDHSVEPVWPELxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCVTHGEGVGVSVSAFKKDVIVNAVEYCAYSHSQRSIFGSSTDGLNAERFHVLTESDQSGIRF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain