SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene59019

Length: 422 nt

UniGene Fasta

>sp_v3.0_unigene59019
CATGGTGATTCCAAACAGGCCTTCTTTGGCGTCTTCGATGGTCATAAAGCTTCAGATTTCGCTGCCGAAAATATTGGGCACAATATTGTGGATGCTATGCTCGCCATGAAAGATGAAACAGAGAACCTTCTCGAAGAAGCTGTTAGAGCTGGGTACCTAAAAACAGATGCAGAGTTTTTGAAGGAGAATGTCAGCGGCGGGCTAAAGCTAACTTCAGTTATTTGTTTATTTTATATTCTGAGAGTCTATCGACAAGGCATGTGGTTGTGAATGGCCCCACAGATATGATCATGAATTACTCAATTGATGGCCATCTTGAAAAGGAAATGATTGGGATTCTAATTAAGCAAGAAAATAGCCGGTGGATCTTAATATGATATTATCAGGAAACTCGAGAATATAGCGAAATAACTTAAATAAAT

Ace file of the UniGene sp_v3.0_unigene59019

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative protein phosphatase 2C 25 [Arabidopsis thaliana] sp\|O80871.1\|P2C25_ARATH RecName: Full=Probable protein phosphatase 2C 25; Short=AtPP2C25; AltName: Full=Protein phosphatase AP2C1 gb\|AAK43913.1\|AF370594_1 putative protein phosphatase 2C [Arabidops	-	-	1.0e-12	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%

Source	Gene names
Sma3	At2g30020; F23F1.6; GSVIVT00029318001; POPTRDRAFT_549422;

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine phosphatase complex	GO:0008287	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	protein serine/threonine phosphatase activity	GO:0004722	Molecular Function	-
Sma3	manganese ion binding	GO:0030145	Molecular Function	-
Sma3	protein dephosphorylation	GO:0006470	Biological Process	-
Sma3	response to wounding	GO:0009611	Biological Process	-
Sma3	defense response to fungus	GO:0050832	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein phosphatase 2C, manganese/magnesium aspartate binding site	IPR000222	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3		IPR014045	-	-
Sma3	Protein phosphatase 2C	IPR015655	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G30020.1	Protein phosphatase 2C family protein chr2:12814437-12815904 FORWARD LENGTH=396	2.0e-16	56%
RefSeq	Arabidopsis thaliana	NP_180563.1	putative protein phosphatase 2C 25 [Arabidopsis thaliana]	3.0e-16	56%
RefSeq	Populus trichocarpa	XP_002298484.1	predicted protein [Populus trichocarpa]	2.0e-16	56%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWU5

Fln msg: your sequence is shorter than subject: 90 - 242

Fln protein: HGDSKQAFFGVFDGHKASDFAAENIGHNIVDAMLAMKDETENLLEEAVRAGYLKTDAEFLKENVSGGLKLTSVICLFYILRVYRQGMWL*

Protein Length: 91

Fln nts: CATGGTGATTCCAAACAGGCCTTCTTTGGCGTCTTCGATGGTCATAAAGCTTCAGATTTCGCTGCCGAAAATATTGGGCACAATATTGTGGATGCTATGCTCGCCATGAAAGATGAAACAGAGAACCTTCTCGAAGAAGCTGTTAGAGCTGGGTACCTAAAAACAGATGCAGAGTTTTTGAAGGAGAATGTCAGCGGCGGGCTAAAGCTAACTTCAGTTATTTGTTTATTTTATATTCTGAGAGTCTATCGACAAGGCATGTGGTTGTGA___ATGGCCCCACAGATATGATCATGAATTACTCAATTGATGGCCATCTTGAAAAGGAAATGATTGGGATTCTAATTAAGCAAGAAAATAGCCGGTGGATCTTAATATGATATTATCAGGAAACTCGAGAATATAGCGAAATAACTTAAATAAAT

Fln Alignment:

F7QVD2L01CCBAX___HGDSKQAFFGVFDGH---KASDFAAENIGHNIVDAMLAMKDETENLLEEAVRAGYLKTDAEFLKENVSGGLKLTSVICL
A9NWU5_______________HGDSKRAFFGVFDGHSGRKASDFEAENIGQNIVDAMLGMESETENILEQSVRAGYITTDAEFLKQDVCGGAACVTALII

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain