SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene56472

Length: 272 nt

UniGene Fasta

>sp_v3.0_unigene56472
ATGGGGGAGCTACATGAGTTGAATAAACAGTTGGAGCAGAAGGAGTTGGAGATGAAATTGTTTGGCAAGGTTGATACTGCAGTGCTCAAGCAGCATTTTGGGAAAAAGCTTTTTGAACTTGAAGAGGAGAAGAAGGCTGTACAGATTTCAGATTTGAAGAGAAAGCAGGAAAGTCAAGTCCAGCTTATAAAGCAAAAACAAAGAAGTGATGAAGCAGCAAAGCGGTTGCAAGAAGAAATACAATCCATCAAGGCGCAAAAGGTTCAACTGCA

Ace file of the UniGene sp_v3.0_unigene56472

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	kinesin family member 4/7/21/27 [Arabidopsis thaliana] ref\|NP_851151.1\| kinesin family member 4/7/21/27 [Arabidopsis thaliana] gb\|AAN86114.1\| kinesin-like protein [Arabidopsis thaliana] gb\|AAN86115.1\| kinesin-like protein [Arabidopsis thaliana] gb\|AED9557	-	-	6.0e-12	83%
FL-Next	tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida).	-	-	0.0	88%
Sma3	Kinesin-like protein	-	-	3.624e-06	-

Source	Gene names
Sma3	At5g47820; FRA1; GSVIVT00014868001; GSVIVT00015103001; GSVIVT00019544001; MtrDRAFT_AC150207g32v2; OJ1134_E08.39-1; OJ1134_E08.39-2; OJ1134_E08.39-3; Os09g0114500; OsI_08901; OsI_30388; OsJ_08347; OsJ_28385; PHYPADRAFT_10474; PHYPADRAFT_130123; PHYPADRAFT_

Source	GOs	Term	Type	Identity
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	microtubule associated complex	GO:0005875	Cellular Component	-
Sma3	microtubule motor activity	GO:0003777	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	microtubule-based movement	GO:0007018	Biological Process	-
Sma3	cellulose microfibril organization	GO:0010215	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Kinesin, motor domain	IPR001752	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G47820.1	FRA1 P-loop containing nucleoside triphosphate hydrolases superfamily protein chr5:19366505-19372229 FORWARD LENGTH=1035	9.0e-16	83%
RefSeq	Arabidopsis thaliana	NP_851151.1	kinesin family member 4/7/21/27 [Arabidopsis thaliana]	1.0e-15	83%
RefSeq	Populus trichocarpa	XP_002302432.1	predicted protein [Populus trichocarpa]	5.0e-17	52%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: I1M8P9

Fln msg: Distance to subject end: 406 aas, your sequence is shorter than subject: 90 - 967

Fln protein: MGELHELNKQLEQKELEMKLFGKVDTAVLKQHFGKKLFELEEEKKAVQISDLKRKQESQVQLIKQKQRSDEAAKRLQEEIQSIKAQKVQL

Protein Length: 91

Fln nts: ATGGGGGAGCTACATGAGTTGAATAAACAGTTGGAGCAGAAGGAGTTGGAGATGAAATTGTTTGGCAAGGTTGATACTGCAGTGCTCAAGCAGCATTTTGGGAAAAAGCTTTTTGAACTTGAAGAGGAGAAGAAGGCTGTACAGATTTCAGATTTGAAGAGAAAGCAGGAAAGTCAAGTCCAGCTTATAAAGCAAAAACAAAGAAGTGATGAAGCAGCAAAGCGGTTGCAAGAAGAAATACAATCCATCAAGGCGCAAAAGGTTCAACTGCA

Fln Alignment:

F51TW9001EZVIQ___QISDLKRKQESQVQLIKQKQRSDEAAKRLQEEIQSIKAQKVQL
I1M8P9_______________QILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain