SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene55787

Length: 146 nt

UniGene Fasta

>sp_v3.0_unigene55787
CCGATCTCTACGGCGGTTANCTCACAGGAGGATCTGTGGCTCCTTACTACGAGAGCCTTGGCATAGGGCCCGACAATCAAGCTATACACGAGTTCAGCGATCTCATGTGGCCTCAAGGAAACCAAAACTTTGATGTATTGAATCAT

Ace file of the UniGene sp_v3.0_unigene55787

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	4.0e-12	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%

Source	GOs	Term	Type	e value	Identity
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Oxoglutarate/iron-dependent oxygenase	IPR005123	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NW35

Fln msg: Distance to subject end: 186 aas, your sequence is shorter than subject: 48 - 350

Fln protein: DLYGG*LTGGSVAPYYESLGIGPDNQAIHEFSDLMWPQGNQNFDVLNH

Protein Length: 49

Fln nts: CCGATCTCTACGGCGGTTAaCTCACAGGAGGATCTGTGGCTCCTTACTACGAGAGCCTTGGCATAGGGCCCGACAATCAAGCTATACACGAGTTCAGCGATCTCATGTGGCCTCAAGGAAACCAAAACTTTGATGTATTGAATCAT

Fln Alignment:

F585NNT02JGCTW___YGG*LTGGSVAPYYESLGIGPDNQAIHEFSDLMWPQGNQNF
A9NW35_______________YGGYIQGGSAAPFYESLGIGPHFEAIHEFSDLMWPHGNENF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain