SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene54904

Length: 169 nt

UniGene Fasta

>sp_v3.0_unigene54904
CATTTATTCAAGAGGAGCATTATCCTAGTTAAGGCCTGGTGCTACTATGAGAGTCGCATCCTGGGTGCCCACCATGGGCTTATTTCTACCTATGCTTTGGAGACCTTAGTCTTGTACATATTTAATGTATTCAATAACTCTTTTAGTGGTCCATTGGAGGTTCTGTATC

Ace file of the UniGene sp_v3.0_unigene54904

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	94%
Sma3	Nucleic acid binding protein, putative	-	-	4.793e-08	-

Source	Gene names
Sma3	At2g40520; At2g40520/T2P4.13; At3g51620; At3g56320; CHLREDRAFT_190884; F15G16.80; F18O21_280; GSVIVT00006505001; GSVIVT00023950001; GSVIVT00027014001; GSVIVT00029421001; GSVIVT00037479001; GSVIVT00038703001; LOC_Os03g11240; LOC_Os03g21850; LOC_Os11g02320;

Source	GOs	Term	Type	e value	Identity
Sma3	transferase activity	GO:0016740	Molecular Function	0.0	-
Sma3	nucleotidyltransferase activity	GO:0016779	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Lipocalin	IPR002345	-	-
Sma3	Nucleotidyl transferase domain	IPR002934	-	-
Sma3		IPR015706	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G61690.1	nucleotidyltransferases chr3:22828349-22833477 FORWARD LENGTH=1303	2.0e-30	94%
RefSeq	Arabidopsis thaliana	NP_191728.2	nucleotidyltransferase [Arabidopsis thaliana]	2.0e-30	94%
RefSeq	Populus trichocarpa	XP_002322023.1	predicted protein, partial [Populus trichocarpa]	3.0e-32	92%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6I6B8

Fln msg: Distance to subject end: 1075 aas, your sequence is shorter than subject: 56 - 1310

Fln protein: HLFKRSIILVKAWCYYESRILGAHHGLISTYALETLVLYIFNVFNNSFSGPLEVLY

Protein Length: 57

Fln nts: CATTTATTCAAGAGGAGCATTATCCTAGTTAAGGCCTGGTGCTACTATGAGAGTCGCATCCTGGGTGCCCACCATGGGCTTATTTCTACCTATGCTTTGGAGACCTTAGTCTTGTACATATTTAATGTATTCAATAACTCTTTTAGTGGTCCATTGGAGGTTCTGTATC

Fln Alignment:

F5X2MQL01DDPJJ___HLFKRSIILVKAWCYYESRILGAHHGLISTYALETLVLYIFNVFNNSFSGPLEVLY
F6I6B8_______________HLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFTGPLEVLY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain