SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene54598

Length: 131 nt

UniGene Fasta

>sp_v3.0_unigene54598
ATCTTGCCAGGCTTCGGCTCCTAAGCCTCAGGGTGAATTCTCTCCAGGGAAGCATTCCTGTGGCTCTTGGAGGATGCACCAACCTCACCACGCTTGACCTAAGTAGAAACCATCTCCAAGGTGAGATCCCG

Ace file of the UniGene sp_v3.0_unigene54598

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Leucine Rich Repeat family protein n=28 Tax=Oryza RepID=Q2R2D5_ORYSJ	-	-	7.0e-05	68%
FL-Next	sp=Leucine-rich repeat receptor protein kinase EXS; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	68%

Source	Gene names
Sma3	LOC_Os11g36200; Os11g0570000; OsI_33040; OsI_36534;

Source	GOs	Term	Type	Identity
Sma3	receptor activity	GO:0004872	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	kinase activity	GO:0016301	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9LYN8

Fln msg: Distance to subject end: 655 aas, your sequence is shorter than subject: 43 - 1192

Fln protein: LARLRLLSLRVNSLQGSIPVALGGCTNLTTLDLSRNHLQGEIP

Protein Length: 44

Fln nts: ATCTTGCCAGGCTTCGGCTCCTAAGCCTCAGGGTGAATTCTCTCCAGGGAAGCATTCCTGTGGCTCTTGGAGGATGCACCAACCTCACCACGCTTGACCTAAGTAGAAACCATCTCCAAGGTGAGATCCCG

Fln Alignment:

F5V9AAZ01EXQ14___NSLQGSIPVALGGCTNLTTLDLSRNHLQGEIP
Q9LYN8_______________NMFQGKIPVELGDCTSLTTLDLGSNNLQGQIP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain