SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene52940

Length: 374 nt

UniGene Fasta

>sp_v3.0_unigene52940
TTCTAACATGTCCTCTGTCACTTCTCAAGTGCAACGGGACAGTATTCGATCTGCACAACAATCTGGATCTCTTACTCGTGATTTGTCCTCAACAGCAATGGAATCAGCATCAGCTGCTGATGGTATCTCTAATGTTGAAGGAGCAAGTGGACCCTACCGCAATGCAAATGTTTCTAATATGTGTGCTCCAAATTATGGTATGAATGGGTATCCAATTAATTCAATGTTACCATCCATGATGTCTGGATACATTGCTCCAGGTAGTCTACATCCTACATTTGATAATGGTGTTGCTGGCATCGACTCAAGAAATTCAATGTCCAGGGCAATGCGCGTGGCCCTTCCATCAGCCAATCTACGGACCGCAGACTCCT

Ace file of the UniGene sp_v3.0_unigene52940

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	protein EXORDIUM like 2 [Arabidopsis thaliana] gb\|AAG41473.1\|AF326891_1 putative phi-1 protein [Arabidopsis thaliana] gb\|AAK00390.1\|AF339708_1 putative phi-1 protein [Arabidopsis thaliana] gb\|AAK55719.1\|AF380638_1 AT5g64260/MSJ1_10 [Arabidopsis thaliana]	-	-	3.0e-06	90%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Sma3	Chromosome chr18 scaffold_1, whole genome shotgun sequence	-	-	9.306e-06	-

Source	Gene names
Sma3	At5g64260; GSVIVT00015200001; GSVIVT00015203001; GSVIVT00015204001; Os02g0756800; OsI_08995; OsJ_08447; P0471A11.7; P0627E03.43; POPTRDRAFT_209424; POPTRDRAFT_258367; POPTRDRAFT_286046; POPTRDRAFT_651265; POPTRDRAFT_651266; POPTRDRAFT_680592; RCOM_0823860

Source	GOs	Term	Type	e value	Identity
Sma3	plant-type cell wall	GO:0009505	Cellular Component	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphate-induced protein 1	IPR006766	-	0.0	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NP05

Fln msg: Distance to subject end: 102 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 30 - 212

Fln protein: MVLLASTQEIQCPGQCAWPFHQPIYGPQTP

Protein Length: 31

Fln nts: TTCTAACATGTCCTCTGTCACTTCTCAAGTGCAACGGGACAGTATTCGATCTGCACAACAATCTGGATCTCTTACTCGTGATTTGTCCTCAACAGCAATGGAATCAGCATCAGCTGCTGATGGTATCTCTAATGTTGAAGGAGCAAGTGGACCCTACCGCAATGCAAATGTTTCTAATATGTGTGCTCCAAATTATGGTATGAATGGGTATCCAATTAATTCAATGTTACCATCCATGATGTCTGGATACATTGCTCCAGGTAGTCTACATCCTACATTTGATA_-_ATGGTGTTGCTGGCATCGACTCAAGAAATTCAATGTCCAGGGCAATGCGCGTGGCCCTTCCATCAGCCAATCTACGGACCGCAGACTCCT

Fln Alignment:

F5X2MQL01D8I8D___EIQCPGQCAWPFHQPIYGPQTP
A9NP05_______________ETQCPGQCAWPFHQPIYGPQTP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain