SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene52898

Length: 177 nt

UniGene Fasta

>sp_v3.0_unigene52898
ATGGGGGCAGTCTTAGATATTCAATTCAGTGGGATTGATTTTAACAGGCTTGGGCAATTATGGCAACAATCGGCAGCAGGATTCTGATAATTGGAGCAACTGGTTACATAGGTCGTTATATTGCAAAAGCCAGCCTTGATTCTGGCCATCCCACCTTCCTTCTTGTGAGGAAGTTCA

Ace file of the UniGene sp_v3.0_unigene52898

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phenylcoumaran benzylic ether reductase n=6 Tax=Pinaceae RepID=O81651_PINTA	-	-	4.0e-08	84%
FL-Next	tr=Phenylcoumaran benzylic ether reductase PT1; Pinus taeda (Loblolly pine).	-	-	0.0	84%
Sma3	Phenylcoumaran benzylic ether reductase	-	-	7.606e-08	-

Source	Gene names
Sma3	DDCBER1;

Source	GOs	Term	Type	Identity
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	transcription repressor activity	GO:0016564	Molecular Function	-
Sma3	regulation of nitrogen utilization	GO:0006808	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	NmrA-like	IPR008030	-	0.0	-
Sma3	NAD(P)-binding domain	IPR016040	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: Q9LL41

Fln msg: Distance to subject end: 270 aas, your sequence is shorter than subject: 39 - 308

Fln protein: MATIGSRILIIGATGYIGRYIAKASLDSGHPTFLLVRKF

Protein Length: 40

Fln nts: ATGGGGGCAGTCTTAGATATTCAATTCAGTGGGATTGATTTTAACAGGCTTGGGCAATT_-_ATGGCAACAATCGGCAGCAGGATTCTGATAATTGGAGCAACTGGTTACATAGGTCGTTATATTGCAAAAGCCAGCCTTGATTCTGGCCATCCCACCTTCCTTCTTGTGAGGAAGTTCA

Fln Alignment:

F5X2MQL01CSSKE___SRILIIGATGYIGRYIAKASLDSGHPTFLLVRK
Q9LL41_______________SRILLIGATGYIGRHVAKASLDLGHPTFLLVRE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain