SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene52669

Length: 239 nt

UniGene Fasta

>sp_v3.0_unigene52669
AATTCTAGTTGATGATAAATCACATTTTTTCTTTCCTCCTATTATTAGAGGGACACACAGCATTAAAGATACTTTGACAGCAGTTACTGGGCTGTTGTACCGTTTCATCACACTGTTCTTGATGAGGGTGGTGTAAGCAATTTAGTTCTTGGTTTTGCACATTGTGGGATGGTTGCAGCTGCTCGTTGGATTGCACGGCTTGCAACTCCTTGCCTGTTGAATGCATTGGCTAAGTATCC

Ace file of the UniGene sp_v3.0_unigene52669

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Triacylglycerol lipase, putative n=1 Tax=Ricinus communis RepID=B9RTA9_RICCO	-	-	2.0e-22	81%
FL-Next	tr=Triacylglycerol lipase, putative; Ricinus communis (Castor bean).	-	-	0.0	55%
Sma3	Lipase family protein, expressed	-	-	6.637e-08	-

Source	Gene names
Sma3	AT4g16070; At3g14075; GSVIVT00033057001; GSVIVT00034059001; LOC_Os03g61540; LOC_Os11g43760; LOC_Os12g36770; OJ1116_C07.9; OJ1369_G08.3; OSJNBa0008D05.32; OSJNBa0078D06.15; OSJNBb0027B08.13; Os01g0309900; Os02g0780700; Os03g0830900; Os12g0554500; OsI_01582

Source	GOs	Term	Type	Identity
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	-
Sma3	lipid catabolic process	GO:0016042	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-
Sma3	Mono-/di-acylglycerol lipase, N-terminal	IPR005592	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G14075.1	" Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 chr3:4663819-4666338 REVERSE LENGTH=642"	4.0e-23	77%
RefSeq	Arabidopsis thaliana	NP_001189887.1	lipase class 3 family protein [Arabidopsis thaliana]	5.0e-23	77%
RefSeq	Populus trichocarpa	XP_002328592.1	predicted protein [Populus trichocarpa]	2.0e-24	79%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9RTA9

Fln msg: Overlapping hits, possible frame ERROR between 106 and 91, Distance to subject end: 390 aas, your sequence is shorter than subject: 79 - 640

Fln protein: ILVDDKSHFFFPPIIRGTHSIKDTLTAVTxxxxxxxHTVLDEGGVSNLVLGFAHCGMVAAARWIARLATPCLLNALAKY

Protein Length: 80

Fln nts: AATTCTAGTTGATGATAAATCACATTTTTTCTTTCCTCCTATTATTAGAGGGACACACAGCATTAAAGATACTTTGACAGCAGTTACTxxxxxxxxxxxxxxxxxxxxxCACACTGTTCTTGATGAGGGTGGTGTAAGCAATTTAGTTCTTGGTTTTGCACATTGTGGGATGGTTGCAGCTGCTCGTTGGATTGCACGGCTTGCAACTCCTTGCCTGTTGAATGCATTGGCTAAGTATCC

Fln Alignment:

F51TW9002HOHRC___LVDDKSHFFFPPIIRGTHSIKDTLTAVTGxxxxxHHTVLDEGGVSNLVLGFAHCGMVAAARWIARLATPCLLNALAKY
B9RTA9_______________IIHDKDLKCFLLLIRGTHSIKDTLTAATGxxxxxHHSVLHDGGISNLVLGYAHCGMVAAARWIAKLSTPCLLEALADY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain