SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene51422

Length: 135 nt

UniGene Fasta

>sp_v3.0_unigene51422
GNCCACAGAGCTCGGNCATGCTGCCCATACATGTATCAATTAAGACCAGGGGCAAGGGAGCTCTAGGCGCCCGTTGCGATTTCATAGGCTCTCCAACCAATTTAGAAATGATTACCAGCACGTCGATGATGTTGG

Ace file of the UniGene sp_v3.0_unigene51422

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	photosystem I reaction center subunit X psaK [Nicotiana tabacum]	-	-	1.0e-06	75%
FL-Next	tr=Chloroplast photosystem I reaction center subunit; Picea wilsonii.	-	-	0.0	81%

Source	Gene names
Sma3	GSVIVT00028382001; VITISV_038784;

Source	GOs	Term	Type	e value	Identity
Sma3	photosystem I	GO:0009522	Cellular Component	0.0	-
Sma3	photosynthesis	GO:0015979	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Photosystem I PsaG/PsaK protein	IPR000549	-	-
Sma3	Photosystem I PsaG/PsaK, plant	IPR016370	-	-
Sma3	Photosystem I PsaK, reaction centre, plant	IPR017493	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: H9NIE9

Fln msg: Distance to subject end: 65 aas, your sequence is shorter than subject: 44 - 140

Fln protein: PQSSAMLPIHVSIKTRGKGALGARCDFIGSPTNLEMITSTSMML

Protein Length: 45

Fln nts: GaCCACAGAGCTCGGcCATGCTGCCCATACATGTATCAATTAAGACCAGGGGCAAGGGAGCTCTAGGCGCCCGTTGCGATTTCATAGGCTCTCCAACCAATTTAGAAATGATTACCAGCACGTCGATGATGTTGG

Fln Alignment:

EPDB_AL749984___PQSSAMLPIHVSIKTRGKGALGARCDFIGSPTNLEMITSTSMML
H9NIE9_______________PQSSAMLPIHVSVRARGKGALGARCDFIGSPTNLIMVTTTTLML

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain