SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene50551

Length: 194 nt

UniGene Fasta

>sp_v3.0_unigene50551
GAGGAGCGTCAAGAAATATATCATCTGAAAGCTATACAAACATGTACAGAAAAGTGGGAGCAGATGAAGTCACACAGAAACTCAATGTTTTGGTTTCTCAGTTACCTTGGGATGCCCTCAAGACTGGCATGTCAAGGCTGGCAACGAGTGCAGAATCCTTTCTTGCTTTACGTTCACAGTTTGTTCGAAGCTTA

Ace file of the UniGene sp_v3.0_unigene50551

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	66%

Source	Gene names
Sma3	PHYPADRAFT_233442;

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	DNA binding	GO:0003677	Molecular Function	-
Sma3	DNA-dependent protein kinase activity	GO:0004677	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	double-strand break repair via nonhomologous end joining	GO:0006303	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Phosphatidylinositol 3-/4-kinase, catalytic domain	IPR000403	-	-
Sma3	PIK-related kinase, FAT	IPR003151	-	-
Sma3	PIK-related kinase, FATC	IPR003152	-	-
Sma3	NUC194	IPR012582	-	-
Sma3	PIK-related kinase	IPR014009	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9SH90

Fln msg: Distance to subject end: 235 aas, your sequence is shorter than subject: 64 - 4165

Fln protein: GASRNISSESYTNMYRKVGADEVTQKLNVLVSQLPWDALKTGMSRLATSAESFLALRSQFVRSL

Protein Length: 65

Fln nts: GAGGAGCGTCAAGAAATATATCATCTGAAAGCTATACAAACATGTACAGAAAAGTGGGAGCAGATGAAGTCACACAGAAACTCAATGTTTTGGTTTCTCAGTTACCTTGGGATGCCCTCAAGACTGGCATGTCAAGGCTGGCAACGAGTGCAGAATCCTTTCTTGCTTTACGTTCACAGTTTGTTCGAAGCTTA

Fln Alignment:

CL14724Contig1___SESYTNMYRKVGADEVTQKLNVLVSQLPWDALKTGMSRLATSAESFLALRSQFVRSL
A9SH90_______________TECYCNLYRKVGFEEVSLKLSALQGQLPWDTLRMGFSRLVTSAESYLALRSQFARSL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain