UniGene Name: sp_v3.0_unigene48749
Length: 147 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
UniGene Fasta (sense) |
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>sp_v3.0_unigene48749
G |
Ace file of the UniGene sp_v3.0_unigene48749 (antisense) |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | RecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Short=BPG-independent PGAM; Short=Phosphoglyceromutase; AltName: Full=PGAM-I emb|CAA49994.1| phosphoglycerate mutase [Nicotiana tabacum] | - | - | 4.0e-10 | 73% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 76% |
Sma3 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - | - | 3.299e-17 | - |
Source | ECs | Term | Type | e value | Identity |
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Sma3 | Phosphoglycerate mutase. | EC:5.4.2.1 | - | 6.894e-26 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Glycolysis / Gluconeogenesis | 00010 | 6.894e-26 | % | |
Sma3 | Methane metabolism | 00680 | 6.894e-26 | % | |
Sma3 | Biosynthesis of phenylpropanoids | 01061 | 6.894e-26 | % | |
Sma3 | Biosynthesis of terpenoids and steroids | 01062 | 6.894e-26 | % | |
Sma3 | Biosynthesis of alkaloids derived from shikimate pathway | 01063 | 6.894e-26 | % | |
Sma3 | Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid | 01064 | 6.894e-26 | % | |
Sma3 | Biosynthesis of alkaloids derived from histidine and purine | 01065 | 6.894e-26 | % | |
Sma3 | Biosynthesis of alkaloids derived from terpenoid and polyketide | 01066 | 6.894e-26 | % | |
Sma3 | Biosynthesis of plant hormones | 01070 | 6.894e-26 | % | |
Sma3 | Metabolic pathways | 01100 | 6.894e-26 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 6.894e-26 | % |
Source | Gene names |
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Sma3 | AT3G08590; At1g09780; At3g08590; B1148D12.28; F17O14.6; F21M12.16; GSVIVT00033622001; LOC_Os03g21260; MICPUCDRAFT_26927; MICPUN_96333; OSJNBa0095J22.15; Os01g0817700; Os03g0330200; Os05g0482700; OsI_04213; OsI_11413; OsI_20375; OsJ_03874; OsJ_10707; OsJ_1 |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | mitochondrial envelope | GO:0005740 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
Sma3 | phosphoglycerate mutase activity | GO:0004619 | Molecular Function | 0.0 | - |
Sma3 | manganese ion binding | GO:0030145 | Molecular Function | 0.0 | - |
Sma3 | glucose catabolic process | GO:0006007 | Biological Process | 0.0 | - |
Sma3 | glycolysis | GO:0006096 | Biological Process | 0.0 | - |
Sma3 | response to stress | GO:0006950 | Biological Process | 0.0 | - |
Sma3 | response to cold | GO:0009409 | Biological Process | 0.0 | - |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | IPR005995 | - | 0.0 | - |
Sma3 | Metalloenzyme | IPR006124 | - | 0.0 | - |
Sma3 | BPG-independent PGAM, N-terminal | IPR011258 | - | 0.0 | - |
Sma3 | Alkaline phosphatase-like, alpha/beta/alpha | IPR017849 | - | 0.0 | - |
Sma3 | Beta-ketoacyl synthase, active site | IPR018201 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G09780.1 | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent chr1:3165550-3167812 REVERSE LENGTH=557 | 2.0e-13 | 68% |
RefSeq | Arabidopsis thaliana | NP_563852.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 [Arabidopsis thaliana] | 2.0e-13 | 68% |
RefSeq | Populus trichocarpa | XP_002323696.1 | predicted protein [Populus trichocarpa] | 6.0e-14 | 71% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: B8LMV6
Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 269 aas, your sequence is shorter than subject: 39 - 377
Fln protein:
E
Protein Length:
40
Fln nts:
G
Fln Alignment:
CL14206Contig1___EKWTPIKAHGPAVGLPT--DMGNGEVGHNALGVGRIFSQG*AITDF
B8LMV6_______________EKWTLIKAHGPAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDY
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain