SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene43441

Length: 186 nt

UniGene Fasta

>sp_v3.0_unigene43441
GATATTACCTCTTTTTATTGAGAGTTTGGAAGAGGGTGATGCTTCAACACCTAGCCTTTTGCGGCTTAGGCTTTTGGATGCAGTGGCTCGCATGGCAAGCTTAGGTTTTGAGAAATCATATCGTGAAACAGTAGTATTGCTAACAAGGAGCTATTTAGATAAACTCTCTACTGTTGGATCAACTCA

Ace file of the UniGene sp_v3.0_unigene43441

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative Phosphatidylinositol 4-kinase PI4K [Arabidopsis thaliana]	-	-	3.0e-17	76%
FL-Next	sp=Phosphatidylinositol 4-kinase alpha; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	85%

Source	Gene names
Sma3	F13F21.23; GSVIVT00036418001; OSJNBb0033N16.8; OsI_13242; OsJ_12315; POPTRDRAFT_556445; POPTRDRAFT_557279; RCOM_0937410;

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	inositol or phosphatidylinositol kinase activity	GO:0004428	Molecular Function	-
Sma3	1-phosphatidylinositol 4-kinase activity	GO:0004430	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	phosphotransferase activity, alcohol group as acceptor	GO:0016773	Molecular Function	-
Sma3	phosphatidylinositol phosphorylation	GO:0046854	Biological Process	-
Sma3	phosphatidylinositol-mediated signaling	GO:0048015	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Phosphatidylinositol 3-/4-kinase, catalytic domain	IPR000403	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Phosphoinositide 3-kinase, accessory (PIK) domain	IPR001263	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Phosphatidylinositol Kinase	IPR015433	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Phosphatidylinositol 3/4-kinase, conserved site	IPR018936	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G49340.2	ATPI4K ALPHA Phosphatidylinositol 3- and 4-kinase family protein chr1:18252355-18263967 FORWARD LENGTH=2028	3.0e-22	85%
RefSeq	Arabidopsis thaliana	NP_850960.1	phosphatidylinositol 4-kinase alpha [Arabidopsis thaliana]	4.0e-22	85%
RefSeq	Populus trichocarpa	XP_002306092.1	predicted protein [Populus trichocarpa]	7.0e-22	88%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9SXA1

Fln msg: Distance to subject end: 1437 aas, your sequence is shorter than subject: 61 - 2028

Fln protein: ILPLFIESLEEGDASTPSLLRLRLLDAVARMASLGFEKSYRETVVLLTRSYLDKLSTVGST

Protein Length: 62

Fln nts: GATATTACCTCTTTTTATTGAGAGTTTGGAAGAGGGTGATGCTTCAACACCTAGCCTTTTGCGGCTTAGGCTTTTGGATGCAGTGGCTCGCATGGCAAGCTTAGGTTTTGAGAAATCATATCGTGAAACAGTAGTATTGCTAACAAGGAGCTATTTAGATAAACTCTCTACTGTTGGATCAACTCA

Fln Alignment:

CL16249Contig1___ILPLFIESLEEGDASTPSXXXXXXXDAVARMASLGFEKSYRETVVLLTRSYLDKLSTVGS
Q9SXA1_______________ILPLFIESLEEGDASTPSFLRLQLLDAVSRIATLGFDKSYRETVVLMTRSYLSKLSSVGS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain