SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene41121

Length: 185 nt

UniGene Fasta

>sp_v3.0_unigene41121
AGATGATATTTTACGTTCTGGTTGTGCTTGGCTTATGGGTGTTCCAGCAGGATTCAAGCTGAACACTAAACTTGCTGAAACATTGGGAATATTTTCACTGACTAGCATCCAAGTCTGGTCTACTTTATGGTTCTTTGTTAAGCCACTTTTAAAGCATGGCATTAAAGTGCTAGCTGTCTCTGGAT

Ace file of the UniGene sp_v3.0_unigene41121

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	N-acetylglucosaminyl transferase component family protein / Gpi1 family protein [Arabidopsis thaliana] gb\|AEE79623.1\| N-acetylglucosaminyl transferase component family protein / Gpi1 family protein [Arabidopsis thaliana]	-	-	9.0e-13	61%
FL-Next	tr=Uncharacterized protein; Zea mays (Maize).	-	-	0.0	69%

Source	Gene names
Sma3	F24I3.250; F28O9.10; GSVIVT00025323001; MtrDRAFT_AC158502g10v2; OsI_19304; POPTRDRAFT_416545; RCOM_0255010; VITISV_027128;

Source	GOs	Term	Type	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	phosphatidylinositol N-acetylglucosaminyltransferase activity	GO:0017176	Molecular Function	-
Sma3	GPI anchor biosynthetic process	GO:0006506	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	N-acetylglucosaminyl transferase component	IPR007720	-	0.0	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G57170.1	N-acetylglucosaminyl transferase component family protein / Gpi1 family protein chr3:21159620-21162259 REVERSE LENGTH=560	2.0e-17	61%
RefSeq	Arabidopsis thaliana	NP_191276.2	N-acetylglucosaminyl transferase component family protein / Gpi1 family protein [Arabidopsis thaliana]	3.0e-17	61%
RefSeq	Populus trichocarpa	XP_002308913.1	predicted protein, partial [Populus trichocarpa]	2.0e-18	60%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B7ZY60

Fln msg: Distance to subject end: 261 aas, your sequence is shorter than subject: 61 - 426

Fln protein: DDILRSGCAWLMGVPAGFKLNTKLAETLGIFSLTSIQVWSTLWFFVKPLLKHGIKVLAVSG

Protein Length: 62

Fln nts: AGATGATATTTTACGTTCTGGTTGTGCTTGGCTTATGGGTGTTCCAGCAGGATTCAAGCTGAACACTAAACTTGCTGAAACATTGGGAATATTTTCACTGACTAGCATCCAAGTCTGGTCTACTTTATGGTTCTTTGTTAAGCCACTTTTAAAGCATGGCATTAAAGTGCTAGCTGTCTCTGGAT

Fln Alignment:

CL9111Contig1___ILRSGCAWLMGVPAGFKLNTKLAETLGIFSLTSIQVWSTLWFFVKPLLKHGIKVLAVSG
B7ZY60_______________ILRSGCVWLMGVPAGFKLNTELAELLGMISLNAVQIYSTLWFFVGGYLRHIIQGIAVSG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain