SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene39393

Length: 218 nt

UniGene Fasta

>sp_v3.0_unigene39393
GTGGCCTGCACTCGCTTTAAAGCAGAGTTTCCCATATTTGACAAGGTCTTCATATTCTGATCTTTATACCATCTTGGATTTCTTCAGACTCTAGAGGATTCATCTAAACATAACCAGTCCATCTGGTTGCTTCTTTGGATCCTTGGTGTTAAGTAGCAATTCTGTGATGCAGGTCGAAGTTAATGGTAATAATGCAGCTCCTCTCTACAAGTTCTTGA

Ace file of the UniGene sp_v3.0_unigene39393

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glutathione peroxidase (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z6F2_PICSI	-	-	7.0e-05	100%
FL-Next	sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NQB1

Fln msg: Separated hits, possible frame ERROR between 48 and 170, Distance to subject end: 51 aas, your sequence is shorter than subject: 73 - 246

Fln protein: VACTRFKAEFPIFDKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxQVEVNGNNAAPLYKFL

Protein Length: 74

Fln nts: GTGGCCTGCACTCGCTTTAAAGCAGAGTTTCCCATATTTGACAAGGTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCAGGTCGAAGTTAATGGTAATAATGCAGCTCCTCTCTACAAGTTCTTGA

Fln Alignment:

CL10429Contig1___VACTRFKAEFPIFDKVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxQVEVNGNNAAPLYKFL
A9NQB1_______________VACTRFKAEFPIFDKVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKVEVNGSNAAPIYKFL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain