SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene34843

Length: 1126 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene34843

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB	-	-	95%
FL-Next	tr=Caffeic acid O-3-methyltransferase; Pinus pinaster (Maritime pine).	-	-	98%
Sma3	Caffeic acid 3-O-methyltransferase	-	-	-

Source	ECs	Term	Type	e value	Identity
Sma3	(S)-scoulerine 9-O-methyltransferase.	EC:2.1.1.117	-	5.761e-07	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Isoquinoline alkaloid biosynthesis	00950		5.761e-07	%
Sma3	Biosynthesis of alkaloids derived from shikimate pathway	01063		5.761e-07	%
Sma3	Biosynthesis of secondary metabolites	01110		5.761e-07	%
Sma3	(Iso)eugenol O-methyltransferase.	EC:2.1.1.146	-	2.898e-09	-
Sma3	Catechol O-methyltransferase.	EC:2.1.1.6	-	7.519e-24	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Steroid hormone biosynthesis	00140		7.519e-24	%
Sma3	Tyrosine metabolism	00350		7.519e-24	%
Sma3	Betalain biosynthesis	00965		7.519e-24	%
Sma3	Metabolic pathways	01100		7.519e-24	%
Sma3	Caffeate O-methyltransferase.	EC:2.1.1.68	-	0.0	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Phenylpropanoid biosynthesis	00940		0.0	%
Sma3	Biosynthesis of phenylpropanoids	01061		0.0	%
Sma3	Metabolic pathways	01100		0.0	%
Sma3	Biosynthesis of secondary metabolites	01110		0.0	%
Sma3	Quercetin 3-O-methyltransferase.	EC:2.1.1.76	-	1.747e-09	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Flavone and flavonol biosynthesis	00944		1.747e-09	%

Source	Gene names
Sma3	AOMT1; AOMT3; At1g21100; At1g21110; At1g21110/T22I11_6; At1g21120; At1g21130; At1g33030; At1g51990; At1g76790; At1g77530; At3g53140; At5g53810; At5g54160; BANMT1; BMT; COMT; COMT-1; COMT1; COMT2; COMT2-2A; COMT3; COMT4; COMT5; COMT6; COMTL1; COMTL2; COMTL

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	O-methyltransferase activity	GO:0008171	Molecular Function	-
Sma3	catechol O-methyltransferase activity	GO:0016206	Molecular Function	-
Sma3	5-hydroxyfuranocoumarin 5-O-methyltransferase activity	GO:0030752	Molecular Function	-
Sma3	quercetin 3-O-methyltransferase activity	GO:0030755	Molecular Function	-
Sma3	(S)-scoulerine 9-O-methyltransferase activity	GO:0030777	Molecular Function	-
Sma3	3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase activity	GO:0030784	Molecular Function	-
Sma3	(RS)-norcoclaurine 6-O-methyltransferase activity	GO:0030786	Molecular Function	-
Sma3	inositol 4-methyltransferase activity	GO:0030787	Molecular Function	-
Sma3	myricetin 3'-O-methyltransferase activity	GO:0033799	Molecular Function	-
Sma3	protein dimerization activity	GO:0046983	Molecular Function	-
Sma3	caffeate O-methyltransferase activity	GO:0047763	Molecular Function	-
Sma3	(iso)eugenol O-methyltransferase activity	GO:0050630	Molecular Function	-
Sma3	lignin biosynthetic process	GO:0009809	Biological Process	-
Sma3	flavonol biosynthetic process	GO:0051555	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Ornithine/DAP/Arg decarboxylase	IPR000183	-	-
Sma3	O-methyltransferase, family 2	IPR001077	-	-
Sma3	Immunoglobulin/major histocompatibility complex, conserved site	IPR003006	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Winged helix-turn-helix transcription repressor DNA-binding	IPR011991	-	-
Sma3	Plant methyltransferase dimerisation	IPR012967	-	-
Sma3	O-methyltransferase, COMT, eukaryota	IPR016461	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G54160.1	ATOMT1, OMT1 O-methyltransferase 1 chr5:21982075-21984167 FORWARD LENGTH=363	56%
RefSeq	Arabidopsis thaliana	NP_200227.1	Quercetin 3-O-methyltransferase 1 [Arabidopsis thaliana]	56%
RefSeq	Populus trichocarpa	XP_002317838.1	caffeic acid 3-O-methyltransferase [Populus trichocarpa]	60%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: G3C8Z7

Fln msg: Overlapping hits, possible frame ERROR between 585 and 575, atg_distance in limit (1-15): atg_distance = 14, W2: There is no M at the beginning,

Fln protein: IVNEDEWLLGMELGNFSCLPMAMKAAIELDVLQIIANAGNGVQLSPRQIVAHIPTTNPDAAITLDRILRALASHSVLSCSVTTDENGKAERLYGLTPLCKYLVKNQDGVSLAPLVLMNQDKVLMESWYYLKDAVLDGSQPFTKAHGMNAFEYPAMDQRFNRVFNRGMSEHSTLLMNKILDTYEGFKEVQELxxxxxGGVGSTLNLIVSKYPHISGINFDMPHVVADAPHYPAVKHVGGDMFDSVPSGQTIFMKWILHDWSDDDSVKVLKNCHKALPEKGMVIVVDVILPVAAETSPYARQASHLDLMMLAYSPGGKERTEQEFQELGHAAGFEGGVKPICCVNGLWVMEFHK*

Protein Length: 354

Fln nts: ATTGTGA_-_ATGAAGATGAATGGCTTCTGGGCATGGAACTCGGGAATTTCTCCTGCCTTCCTATGGCTATGAAGGCAGCCATTGAGCTCGATGTCCTCCAAATCATAGCAAATGCCGGCAATGGCGTCCAGCTCTCGCCCAGACAAATCGTTGCCCACATTCCAACCACGAACCCCGACGCTGCCATTACACTTGATCGGATCCTCAGAGCATTAGCCAGCCATTCGGTTCTGAGCTGCTCTGTGACCACGGACGAGAATGGCAAGGCCGAGAGGCTCTATGGCCTCACTCCTCTCTGCAAATATCTGGTCAAGAACCAGGATGGAGTTTCTCTGGCTCCATTGGTGTTGATGAATCAAGATAAGGTGTTGATGGAGTCCTGGTATTATCTCAAGGACGCGGTGCTGGATGGTTCCCAGCCATTCACCAAAGCCCATGGAATGAATGCGTTCGAGTACCCAGCCATGGACCAGAGATTCAACCGGGTTTTCAACCGGGGAATGTCTGAGCATTCTACCTTGTTGATGAACAAGATTCTGGATACTTACGAGGGTTTTAAGGAGGTTCAGGAATTGxxxxxxxxxxxxxxxGGAGGAGTTGGGTCGACTCTCAATCTCATAGTCTCTAAGTATCCCCACATTTCAGGAATCAACTTTGACATGCCCCATGTGGTGGCCGATGCTCCTCACTATCCAGCTGTGAAACATGTGGGTGGAGACATGTTTGATAGCGTACCAAGTGGCCAAACAATTTTTATGAAGTGGATTCTGCATGATTGGAGTGACGATGATTCCGTAAAGGTTTTGAAGAATTGTCACAAGGCATTGCCAGAGAAAGGGATGGTGATTGTGGTGGACGTCATTCTCCCAGTGGCTGCAGAGACATCTCCTTACGCTCGACAGGCATCTCATTTAGATTTGATGATGTTGGCATACAGTCCGGGGGGCAAGGAGCGGACTGAGCAAGAATTTCAAGAGTTGGGGCATGCAGCAGGATTCGAAGGAGGTGTTAAGCCCATATGTTGTGTCAATGGATTGTGGGTAATGGAGTTTCACAAGTAA___GTTTGATGTGATTCTATGGCACTTTGTTTATCTTATGACATATATATACAGTATGGTTCATCTTTAATT

Fln Alignment:

Contig34843___IVNEDEWLLGMELGNFSCLPMAMKAAIELDVLQIIANAGNGVQLSPRQIVAHIPTTNPDAAITLDRILRALASHSVLSCSVTTDENGKAERLYGLTPLCKYLVKNQDGVSLAPLVLMNQDKVLMESWYYLKDAVLDGSQPFTKAHGMNAFEYPAMDQRFNRVFNRGMSEHSTLLMNKILDTYEGFKEVQELxxxxGGVGSTLNLIVSKYPHISGINFDMPHVVADAPHYPAVKHVGGDMFDSVPSGQTIFMKWILHDWSDDDSVKVLKNCHKALPEKGMVIVVDVILPVAAETSPYARQASHLDLMMLAYSPGGKERTEQEFQELGHAAGFEGGVKPICCVNGLWVMEFHK
G3C8Z7_______________IVNEDEWLLGMELGNFSCLPMAMKAAIELDVLQIIANAGNGVQLSPRQIVAHIPTTNPDAAITLDRILRALASHSVLSCSVTTDENGKAERLYGLTPLCKYLVKNQDGVSLAPLVLMNQDKVLMESWYYLKDAVLDGSQPFTKAHGMNAFEYPAMDQRFNRVFNRGMSEHSTLLMNKILDTYEGFKEVQELxxxxGGVGSTLNLIVSKYPHISGINFDMPHVVADAPHYPAVKHVGGDMFDSVPSGQAIFMKWILHDWSDDHCLRLLKNCHKALPEKGKVIVVDTILPVAAETSPYARQGFHIDLLMLAYNPGGKERTEQEFRDLAKEVGFAGGVKPVCCVNGMWVMEFHK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain