SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene34502

Length: 1749 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene34502

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP synthase subunit 9, mitochondrial n=5 Tax=Embryophyta RepID=Q95951_SORBI	-	-	2.0e-08	100%
FL-Next	sp=ATP synthase subunit 9, mitochondrial; Triticum aestivum (Wheat). Mitochondrion.	-	-	0.0	100%
Sma3	ATP synthase subunit 9, mitochondrial	-	-	0.0	-

Source	GOs	Term	Type	Identity
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	proton-transporting ATP synthase complex, coupling factor F(o)	GO:0045263	Cellular Component	-
Sma3	hydrogen ion transmembrane transporter activity	GO:0015078	Molecular Function	-
Sma3	ATP synthesis coupled proton transport	GO:0015986	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	ATPase, F0 complex, subunit C	IPR000454	-	0.0	-
Sma3	ATPase, F0/V0 complex, subunit C	IPR002379	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	ATMG01080.1	ATP9 mitochondrial F0-ATPase subunit 9 chrM:278895-279152 FORWARD LENGTH=85	1.0e-11	96%
RefSeq	Arabidopsis thaliana	NP_178769.2	ATP synthase subunit 9 [Arabidopsis thaliana]	1.0e-11	96%
RefSeq	Populus trichocarpa	XP_002333492.1	predicted protein [Populus trichocarpa]	2.0e-12	100%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: P13547

Fln msg:

Fln protein: MLEGAKLIGAGAATIALAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLILFVF*

Protein Length: 76

Fln nts: ATCATTTGCCCTTTTTGACTTCGATGTAGCCTTATGTCAACCCCCCGTAGAGGAGGGTCCGGAGGTCTCTTCCGGGGGATCACTCGGAGCGCTGATGCGCTCGCCGGAAGCCCCATCCCTTGATTGGGATGAGCTTCTCCAAGGGAGAAGCTTAAATCCCGATCAAGGGACGGGGCGGGTCGGCTCGCATACTCCGGGAGACACCGTATCCGGATCTGCTATCGACGGAGGGGCGGCGGCTGCATCGGCGTCAACGCCCGACTCTTTTTCACCTTCCTTAGGTGGCCCCTCGATGATGGGTCTTACTATAACTTTCTTTCCTGGGCCCACTCGTTCCCCGAACATGTTCAACCCTGCCATTGGGGCGCCGCGCCCTGGCTGCCGGAATATCGAGTTGCGCACGAATTCACGGCAGCCAGGGATATCCAAGAGACCTTGGGATGTATATGCTGTCCCAAGGCCTCTTGCCCCCTATGGAAACCGGGGGGTGGGGGTTCTTCATCATCACCCCCTTCCCAGGGATCTGTCTCCGAGCCAGTACGCCTATTTTTGGCAACACTTCCCTCAACCAAAATATTACGTTGGTCTGAGGAGGTAATGCCGCCTTGGGGAGTTGGTTAGGTAAGATAGCCAGAGAGGTAGGTATTGATGAAAGGAACGCCGAAAGAGGGAAGAATCAACGAAGAGAAACCAAATCCGAAGAGAAAGACTAGGAAAAGAACTGACAAGACAGAAATCTCCTTTTCAAT_-_ATGCTGGAAGGTGCGAAATTAATAGGTGCTGGAGCAGCTACAATTGCTTTAGCGGGAGCTGCTGTCGGTATTGGAAACGTTTTTAGTTCCTTGATTCATTCCGTGGCGCGAAATCCATCATTGGCTAAACAATTATTTGGTTATGCCATTTTGGGGTTCGCTTTAACCGAAGCTATTGCATTGTTTGCCTTAATGATGGCGTTTCTGATCTTATTCGTATTCTGA___TGGAGTTGCGGAAATATGGAGTGACGTAGACGGAAACTTCTGCTTCATCTGTCTCTTAAGGCCCCCGGAGGAATAGGCGGGCCTATCCATCTATACCTCCTGGGGGGGGAAGGGAGTGGCGGCGGGCCCTTCCCACTTTGAGGTTCTGGGCGGGCGAATAGATAGGAAATGCTTTTTAGGAAGGATAGAAGAAATATGGGATCAATTCTTTGAGTGACCAGCTGATATCCATGCGATCTTTGGTATCCTCCCGGGTGGTTTTGAGATTCTAGTTATCGCCGATATCGCCGTCGGAGACGCGGGGCAAGCCGACTCTATTGCACCCTGCAACGAAAGCTGAATTGACACGTGATGGATCGGTATGATCCCATCCATGATCCAAGGGTTGATTGACTGGATTGGTACTGGCTGGACTCAATACCCAGACTAGCCATTACACCCACTGATGATCGGCCCCGCTAAGGTGAGGCTTTACCATTGAAGGATTCACCTGATCAGCTATTGAACCAACAGATCGATGAGCCGATCCCAACCAGTTAATGAAAACCCAAATTCATCCAGATCTGTCAAAATCGAGATTGCCAGACCTCGACAAATAGAAAGTGATTAAAAAAAAACGCGCTGTATCACCAGTTTGGGGATCAAGACGATAGATATGACCTTTTGGGAGTGAAAGTGGCCCGTATAGCAGTCGGTGATCCAGTTGATCCAGAAGTCGGTGAAGCAGTACCAGTAGATCCACTTGCACTATGCCATCATTCCTCTCCCGTTGGTC

Fln Alignment:

Contig34502___NVFSSLIHSVARNPSLAKQLFGYAILGFALTE
P13547_______________NVFSSLIHSVARNPSLAKQLFGYAILGFALTE

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
364	3		96		0.988113
394	2		97		0.971188
396			2	97	0.971188
815		80		20	0.999996
1019		11		88	0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain