UniGene Name: sp_v3.0_unigene19178
Length: 212 nt
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>sp_v3.0_unigene19178
C |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Primary amine oxidase (Fragment) n=1 Tax=Vitis vinifera RepID=D7T6W4_VITVI | - | - | 2.0e-29 | 78% |
FL-Next | tr=Putative copper-containing diamine oxidase; Pinus sylvestris (Scots pine). | - | - | 0.0 | 68% |
Sma3 | Copper amine oxidase | - | - | 0.0 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Primary-amine oxidase. | EC:1.4.3.21 | - | 2.022e-11 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Glycine, serine and threonine metabolism | 00260 | 2.022e-11 | % | |
Sma3 | Tyrosine metabolism | 00350 | 2.022e-11 | % | |
Sma3 | Phenylalanine metabolism | 00360 | 2.022e-11 | % | |
Sma3 | beta-Alanine metabolism | 00410 | 2.022e-11 | % | |
Sma3 | Isoquinoline alkaloid biosynthesis | 00950 | 2.022e-11 | % | |
Sma3 | Tropane, piperidine and pyridine alkaloid biosynthesis | 00960 | 2.022e-11 | % | |
Sma3 | Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid | 01064 | 2.022e-11 | % | |
Sma3 | Metabolic pathways | 01100 | 2.022e-11 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 2.022e-11 | % |
Source | Gene names |
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Sma3 | AT4g12280; AT4g12290; AT4g14940; At1g31670; At1g31690; At1g31710/F27M3_9; At1g62810; At3g43670; At4g12280; DAO; F23N14_50; F23N19.18; F27M3_11; F27M3_13; F27M3_9; GSVIVT00001079001; GSVIVT00007265001; GSVIVT00010331001; GSVIVT00019970001; GSVIVT0001997300 |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | cell wall | GO:0005618 | Cellular Component | 0.0 | - |
Sma3 | vacuole | GO:0005773 | Cellular Component | 0.0 | - |
Sma3 | copper ion binding | GO:0005507 | Molecular Function | 0.0 | - |
Sma3 | primary amine oxidase activity | GO:0008131 | Molecular Function | 0.0 | - |
Sma3 | manganese ion binding | GO:0030145 | Molecular Function | 0.0 | - |
Sma3 | quinone binding | GO:0048038 | Molecular Function | 0.0 | - |
Sma3 | amine metabolic process | GO:0009308 | Biological Process | 0.0 | - |
Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Copper amine oxidase | IPR000269 | - | 0.0 | - |
Sma3 | Copper amine oxidase, C-terminal | IPR015798 | - | 0.0 | - |
Sma3 | Copper amine oxidase, N2-terminal | IPR015800 | - | 0.0 | - |
Sma3 | Copper amine oxidase, N2/N3-terminal | IPR015801 | - | 0.0 | - |
Sma3 | Copper amine oxidase, N3-terminal | IPR015802 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT1G31710.1 | Copper amine oxidase family protein chr1:11349855-11355339 FORWARD LENGTH=681 | 1.0e-32 | 70% |
RefSeq | Arabidopsis thaliana | NP_174452.2 | putative copper amine oxidase [Arabidopsis thaliana] | 2.0e-32 | 70% |
RefSeq | Populus trichocarpa | XP_002329857.1 | predicted protein [Populus trichocarpa] | 1.0e-34 | 73% |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: G8C850
Fln msg: Distance to subject end: 26 aas, your sequence is shorter than subject: 70 - 729
Fln protein:
P
Protein Length:
71
Fln nts:
C
Fln Alignment:
Contig19178___PYNYSEQWAGGVYMDQSRGDDTLATWTKRNREIEKEDIVLWHTMGIHHIPCQEDFPVMPTISASFELRPT
G8C850_______________PYNKSEEWAGGLYVYQSKGDDTLSVWSNRNRNIEKKDIVLWYTLGFHHLPCQEDYPIMPTVSSSFDLKPT
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain