SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene17850

Length: 1005 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene17850

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ethylene-forming enzyme n=1 Tax=Picea glauca RepID=Q40839_PICGL	-	-	0.0	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Sma3	Flavonol synthase/flavanone 3-hydroxylase, putative	-	-	1.467e-09	-

Source	ECs	Term	Type	e value	Identity
Sma3	Flavonol synthase.	EC:1.14.11.23	-	2.578e-14	-

Source	KEGGs	Term	e value	Identity
Sma3	Flavonoid biosynthesis	00941	2.578e-14	%
Sma3	Biosynthesis of phenylpropanoids	01061	2.578e-14	%
Sma3	Metabolic pathways	01100	2.578e-14	%
Sma3	Biosynthesis of secondary metabolites	01110	2.578e-14	%

Source	Gene names
Sma3	AT4g25300; At1g17010/F20D23_29; At1g17020; At3g21420; At4g25300; EFE; F20D23.28; F20D23.29; F24A6.140; F6I1.30; GSVIVT00003362001; GSVIVT00006399001; GSVIVT00006402001; GSVIVT00006404001; GSVIVT00007249001; GSVIVT00015839001; GSVIVT00015842001; GSVIVT0001

Source	GOs	Term	Type	Identity
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	(S)-norcoclaurine synthase activity	GO:0050474	Molecular Function	-
Sma3	alkaloid metabolic process	GO:0009820	Biological Process	-
Sma3	organ senescence	GO:0010260	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Isopenicillin N synthase	IPR002283	-	0.0	-
Sma3	Oxoglutarate/iron-dependent oxygenase	IPR005123	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G21420.1	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein chr3:7541579-7543221 FORWARD LENGTH=364	46%
RefSeq	Arabidopsis thaliana	NP_566685.1	oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana]	46%
RefSeq	Populus trichocarpa	XP_002315563.1	predicted protein [Populus trichocarpa]	47%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NW44

Fln msg: your sequence is shorter than subject: 264 - 373

Fln protein: WEPSFRRKAEIRSARGDPQGYGQLFVTSEDQTLDWVTCLLCHSSPTRLKKLALWPTVPTNFRDTVERYALEVERVAQEVLSLFAENLHLEDADYFKNVFGSEPMNLMRMNFYPACPRPDLVLGLSPHADGGGVTLLLQDDEAVGLHVRKNNQWIPVEPIPYAFVINIGDLMEVMTNGKYKSIEHRAVTNKERARLSIANFYNVGVDAEVAPSAKLVDEHHPCLYRQFIHKDYILYHLSKPLKGKQHLAEFAKLDISNTGTSPL*

Protein Length: 265

Fln nts: ATGGGAACCTTCCTTTAGAAGAAAAGCAGAAATCCGCTCCGCAAGGGGAGATCCTCAGGGCTATGGTCAGCTGTTCGTGACATCTGAGGATCAAACGTTGGACTGGGTGACTTGCTTGCTTTGTCACTCAAGCCCAACCAGATTAAAAAAACTCGCCCTCTGGCCAACTGTTCCCACAAATTTCAGGGATACGGTTGAGAGGTATGCACTTGAGGTAGAAAGAGTCGCTCAAGAGGTGTTGAGTCTGTTCGCTGAAAACCTGCATCTGGAAGATGCTGATTATTTCAAGAATGTGTTTGGCTCAGAGCCCATGAATTTGATGCGCATGAACTTCTACCCTGCTTGTCCCAGACCAGACCTTGTTCTCGGATTGAGTCCTCACGCAGATGGAGGGGGAGTAACATTGCTTCTCCAGGATGACGAAGCAGTAGGCTTGCATGTCCGGAAGAACAATCAATGGATTCCTGTGGAGCCCATTCCTTATGCCTTTGTTATAAACATTGGAGACTTGATGGAGGTGATGACAAATGGGAAGTACAAAAGCATAGAACATCGGGCAGTAACAAACAAGGAGAGAGCGAGACTTTCTATCGCTAATTTCTACAATGTAGGTGTGGATGCAGAGGTGGCTCCATCAGCAAAGCTAGTGGATGAACACCACCCATGCTTGTACAGGCAGTTCATTCACAAAGATTACATTCTCTATCACCTCTCAAAGCCACTCAAAGGGAAACAACACCTTGCAGAGTTTGCCAAACTTGACATCAGCAACACCGGAACCTCACCATTGTGA___TTTCAACATTACTTAAAAGAGTGACCATTGCCTGTTTCAATAAATTGGGTGGTGCAGCAGTGTGATGTGTTGGTTGTGTTTTGTCTGCAGTTATGATCATGAATAATATTTGAACTATTGTTTAATCGGGGTGTTTTGATTCAATTGAGTTTTAGTTCATTTTGGTGACAACATCTGTGGCTTACTTTTCTCCATAAGTAAACAGTTGATTT

Fln Alignment:

Contig17850___RRKAEIRSARGDPQGYGQLFVTSEDQTLDWVTCLLCHSSPTRLKKLALWPTVPTNFRDTVERYALEVERVAQEVLSLFAENLHLEDADYFKNVFGSEPMNLMRMNFYPACPRPDLVLGLSPHADGGGVTLLLQDDEAVGLHVRKNNQWIPVEPIPYAFVINIGDLMEVMTNGKYKSIEHRAVTNKERARLSIANFYNVGVDAEVAPSAKLVDEHHPCLYRQFIHKDYILYHLSKPLKGKQHLAEFAKLDI
A9NW44_______________QEKQKCAPQAGDVQGYGKTFVVAEDQTLDWGDLLALALMPNNLKNLALWPTVPTNFRDTVERYAIEVERVAQEVLSLFAENLHLE-AEYFKDKFGSEPTNLMRMNLYPPCPRPDLVLGLSPHSDGGGITLLLQDDQTEGLHVRKNNQWIPVQPIPYALVVNIGDLVEVMTNGRYKSVEHRAVTSQERARLSVALFYSAGIDAEVAPSSKIVDEDQQLLYRKFIHEEYIRYYLSRQLKGKHPLADFAKLDI

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
589		14		85	0.993533
737	47		52		1.0
909	92		7		0.999664
917	4	8		86	0.999539
973			20	80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain