SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene16524

Length: 1213 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene16524

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Peroxidase n=3 Tax=Picea abies RepID=Q4W2V2_PICAB	-	-	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	78%
Sma3	Putative uncharacterized protein	-	-	-

Source	InterPros	Term	Type	Identity
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Plant peroxidase	IPR000823	-	-
Sma3	Peroxidase, active site	IPR019794	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G05340.1	Peroxidase superfamily protein chr5:1579142-1580819 REVERSE LENGTH=324	59%
RefSeq	Arabidopsis thaliana	NP_196153.1	peroxidase 52 [Arabidopsis thaliana]	59%
RefSeq	Populus trichocarpa	XP_002328991.1	predicted protein [Populus trichocarpa]	63%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LR59

Fln msg:

Fln protein: MGSQAQELSVCRMAIRSFVTISLLILLCSTAIYGQLCPEFYDKSCPSVLSIVNSVVKQAIAKEKRMGASLVRLHFHDCFVNGCDGSVLLDDTSTFTGEKTAKPNNNSLRGFDVIDTIKTQVEAACSGVVSCADIVAIAARDSIVELGGPTWMVLLGRRDSTTASLTTANKDIPPPKSSLGALIKAFRKQGLSSQDMVTLSGSHTIGQARCTNFRTRIYNESNEDSSFASLVKANCPSTGGDNNLAGLDLLTPTVFDNNYYNNLKVQKGLLHSDQQLFNGGSADSQVSFYAANPSAFFTDFATSMVKMGNIKVLTGNNGEIRTNCRKVN*

Protein Length: 330

Fln nts: _-_ATGGGAAGCCAAGCACAAGAGCTTTCAGTTTGCAGAATGGCAATCAGAAGCTTTGTAACTATTAGTTTGCTAATTCTTTTGTGTTCCACTGCAATCTATGGGCAACTTTGCCCAGAATTTTATGACAAATCGTGTCCCAGTGTGTTATCCATAGTAAATTCTGTAGTAAAGCAGGCCATAGCCAAGGAAAAACGGATGGGGGCGTCCTTGGTCCGCCTTCACTTTCACGACTGTTTTGTTAACGGTTGCGATGGCTCGGTACTGTTGGATGACACCTCAACATTTACAGGAGAAAAGACTGCAAAACCGAATAACAATTCATTGAGAGGATTCGATGTTATAGACACCATCAAAACTCAAGTGGAGGCAGCTTGCAGTGGTGTCGTGTCGTGTGCAGACATTGTCGCTATTGCTGCTCGTGATTCAATCGTGGAACTGGGAGGCCCGACGTGGATGGTATTGCTAGGAAGGCGAGACTCGACGACTGCTAGTTTAACCACTGCGAACAAAGACATTCCGCCTCCCAAATCAAGCCTCGGTGCCCTCATCAAAGCATTTAGAAAACAAGGGCTTTCTTCCCAAGATATGGTCACACTTTCAGGTTCTCATACGATTGGTCAAGCGCGTTGCACTAACTTCAGAACTCGCATCTACAACGAATCTAACGAAGATTCGTCCTTCGCCAGCTTAGTCAAGGCAAACTGCCCAAGCACAGGAGGCGACAATAACCTCGCAGGCTTGGACCTCCTCACTCCCACTGTCTTTGACAATAACTACTATAACAATCTGAAAGTCCAGAAAGGACTCCTCCACTCTGATCAGCAGCTATTCAACGGGGGTTCTGCTGATAGTCAGGTTTCTTTCTACGCCGCCAATCCAAGTGCTTTCTTCACTGATTTTGCAACTTCCATGGTGAAGATGGGGAACATCAAGGTTCTCACTGGCAACAACGGAGAGATCCGAACAAATTGCAGGAAAGTCAACTGA___TGTCTGGACCTCCTCCACTGAACAATTGCTATTCAGCTCCTCGGAAATAATCTCCATTGTAAAAGATTAATTTAGCTATCTAGCTTAAGGGCCTGATCACGTGCTTGGATTGAAAATGTTGTATTCAATCCACACAAATAAACATATTTAGAAAAATTATAGTGTGGCTAGGATTCCTGTATCATTACATTGGGTAATAAAACACATTCTGGTGGTAAGTGCATTG

Fln Alignment:

Contig16524___MAIRSFVTISLLILLCSTAIYGQLCPEFYDKSCPSVLSIVNSVVKQAIAKEKRMGASLVRLHFHDCFVNGCDGSVLLDDTSTFTGEKTAKPNNNSLRGFDVIDTIKTQVEAACSGVVSCADIVAIAARDSIVELGGPTWMVLLGRRDSTTASLTTANKDIPPPKSSLGALIKAFRKQGLSSQDMVTLSGSHTIGQARCTNFRTRIYNESNEDSSFASLVKANCPSTXXXXXXXXXXXXTPTVFDNNYYNNLKVQKGLLHSDQQLFNGGSADSQVSFYAANPSAFFTDFATSMVKMGNIKVLTGNNGEIRTNCRKVN
B8LR59_______________MGIRIAVCISLLVIVCSTSVYGQLCPDFYDKSCPNVLSIVNSVVMQAVAKEKRMGASLLRLHFHDCFVNGCDGSILLDDTSTFTGEKTANPNNNSVRGFDVIDTIKTQVEATCSGVVSCADIVAIAARDSVVQLGGPTWTVMLGRRDSTSASKSAANNNIPPPTSNLSALISFFQAQGLTTEDMVALSGSHTIGQARCTNFRNRIYNESNIALLFAGLRKANCPVTGGDNNLAPLDLFTPTAFDNSYYNNLQFQNGLLHSDQQLFKGGSTDNRVSFYAVHPDAFFNDFAAAMVKMGNIKPLTVNNGEIRKNCRKIN

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
1204			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain