SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene16256

Length: 1307 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene16256

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] dbj\|BAB08749.1\| carbonyl reductase-like protein [Arabidopsis thaliana] gb\|AAV74232.1\| At5g51030 [Arabidopsis thaliana] gb\|AAW39010.1\| At5g51030 [Arabidopsis thaliana] gb\|AED9602	-	-	5.60519e-45	36%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	52%
Sma3	Carbonyl reductase, putative	-	-	2.84e-16	-

Source	ECs	Term	Type	e value	Identity
Sma3	Prostaglandin-E(2) 9-reductase.	EC:1.1.1.189	-	2.368e-17	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Arachidonic acid metabolism	00590		2.368e-17	%
Sma3	Metabolic pathways	01100		2.368e-17	%

Source	Gene names
Sma3	AT1G01800; At1g01800; At2g24190; At3g61220; At5g51030; E9008; F27D4.10; GSVIVT00001085001; GSVIVT00017397001; GSVIVT00022152001; GSVIVT00022154001; GSVIVT00026770001; GSVIVT00026773001; GSVIVT00026774001; GSVIVT00026775001; GSVIVT00026776001; GSVIVT000267

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	plant-type cell wall	GO:0009505	Cellular Component	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	sugar binding	GO:0005529	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	salutaridine reductase (NADPH) activity	GO:0047037	Molecular Function	-
Sma3	(+)-neomenthol dehydrogenase activity	GO:0047501	Molecular Function	-
Sma3	(-)-menthol dehydrogenase activity	GO:0047504	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	defense response	GO:0006952	Biological Process	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	Short-chain dehydrogenase/reductase SDR	IPR002198	-	-
Sma3	Glucose/ribitol dehydrogenase	IPR002347	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P0D5

Fln msg:

Fln protein: MATEAATSASAEDYDGSDQEKWWTENTVAVVAGSSRGIGLETVRHLAKQGLTVILTARNNAQGLAIAKSIVDEGYPNVHFHQLDVQSDQSVLLLADWIKNKFGGIDILINNFGVMGAKIDWDLWDIRGIVRLVYQSANRSFTEGFIEDYNTAKECVDINYVGAKRMVKALLPLLKPSSSGSRIVNVSSGAGLLQNLENESLRMQLDDVENLSEETIDGFIDMYLNDEKSGEIEGKGWPPRLTAYMVSKIALNAYTRLLARDLQMHDHKVYVNCLHPGSFVKTDMTGQGGDMSAAEAAAYAARVALLPPGGPSGQFFDKEKLLTSF*

Protein Length: 327

Fln nts: ATGGGGGTCACGGGCTAAGACGTTCAGCGTCCGTTCAGGCCACAGATGTCTTTTCCTGCGGCATTGTCATGATAATGTCAAAGTCTTCCTTCAGAAAGATTCCTCTTTGGAACCTCACAAAGCCGAGCAAGAAAGGTCCCTCACTAGGTTACTG_-_ATGGCTACGGAGGCGGCAACTTCAGCATCCGCGGAGGATTATGATGGATCGGATCAGGAAAAATGGTGGACAGAGAATACAGTGGCTGTGGTGGCCGGATCGAGCAGGGGTATTGGCTTGGAGACTGTTCGTCATCTGGCAAAACAGGGTCTCACTGTTATTCTGACTGCCCGTAACAATGCCCAGGGCTTGGCCATTGCAAAATCTATTGTTGATGAAGGATACCCCAATGTTCATTTCCACCAGCTGGATGTGCAGAGCGATCAAAGTGTTTTGCTGTTGGCCGATTGGATAAAAAACAAATTCGGCGGCATCGATATTCTGATTAATAATTTTGGAGTGATGGGAGCGAAAATAGACTGGGATTTATGGGATATTCGGGGCATCGTTCGCCTAGTGTACCAATCAGCCAACAGATCTTTCACAGAAGGTTTCATTGAAGATTACAATACTGCAAAGGAATGCGTTGATATAAATTACGTTGGTGCCAAGAGAATGGTGAAAGCCTTGCTTCCTCTGTTGAAGCCATCATCCTCTGGATCCAGAATTGTGAATGTCTCATCAGGCGCGGGATTGCTTCAGAATCTGGAAAACGAGAGTCTGAGAATGCAGCTTGATGATGTTGAGAACCTGAGCGAAGAAACGATAGATGGGTTTATCGACATGTATCTGAATGACGAGAAATCGGGAGAGATTGAGGGCAAGGGTTGGCCACCTCGTTTGACAGCATACATGGTATCCAAGATAGCCCTCAATGCCTACACTAGGCTTCTGGCCAGAGACCTTCAAATGCATGATCACAAGGTTTATGTGAACTGCTTGCATCCTGGCAGCTTTGTCAAAACTGATATGACAGGACAGGGAGGAGATATGTCGGCAGCAGAAGCCGCGGCTTATGCAGCAAGGGTTGCCCTTCTCCCTCCAGGAGGACCTTCGGGCCAGTTTTTTGACAAAGAAAAGCTTCTAACTTCATTCTAG___TTTAAAGTACGGGGACATAGCCTCTGCATTCAGTGTACATAGTGATAATCTCAGCTTCAAGTGAATATTCGCTTTATGATGTTTGCAGGAATTAGGTCTTTTCTGTAACAGTTGACTGAACAGAGCCGGATTCTTGGAATGTAATGGAATGCGTGCTTTGTGAATGTTGTATTAA

Fln Alignment:

Contig16256___EKWWTENTVAVVAGSSRGIGLETVRHLAKQGLTVILTAR-NNAQGLAI-AKSIVDEGYPNVHFHQLDVQSDQSVLLLADWIKNKFGGIDILINNFGVMGAKIDWDLWDIRGI-VRLVYQSANRSFTEGFIEDYNTAKECVDINYVGAKRMVKAXXXXXXXXXXXXXXXXXXXXAGLLQNLENESLRMQLDDVENLSEETIDGFIDMYLND-EKSGEIEGKGWPPRLTAYMVSKIALNAYTRLLARDLQMHDHKVYVNCLHPGSFVKTDMTGQGGDMSXXXXXXXXXXXXLLPPGGPSGQFF
A9P0D5_______________EEWWRKETVAVVTGANRGIGTEIVRLLADKGITVVLTARCRQQQDLSQQSRALIEEGRKNVVFHTLDIQRDDSVTAFAQWLKNEFGGLDILINNAGLGGAKVDWDLLEKRQMDFRKILEDG--SCAEALTEDEETAKECLGTNYYGTKRISKALIPLLKPSIAEARIVNVSSVLGLLKFLRSETLQRQLSDIENISEEVIDCTVKQFMEDIERGADLRDSVWPVRLPTYSLSKVALNAYTRLLARDL---NGKACVNSVHPG-YVRTSMTFDTGDISSVEGAEYVVRVALLPPSGPSGQNF

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
1081	66			33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain