SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene16130

Length: 4773 nt

UniGene Fasta

>sp_v3.0_unigene16130
CGTCGTGACCTTGGCTGTCACTCATTTCTCGCGTTACCCACCTGGCTTTTGTCTTTAAAAACACATTCATGGATTCGGTAGAGCCCGGGAGGAAAGCAAAATGAGGCACAGCCACGCGGTTGTGTCAAACCAGTTGTACTGATTTTGTGGGAGGGCTGTACAGCTAGTTTAGATTTGGTGGTGGTGGGTTTTCCTACTCGGGCAGGAAATCGTGGGTGGGTTTGTGTATTTTTCGGGGGGCGTGAATTTGTTTGCAGGGCTGGCATCCATAGTGAGCGAGGGGAAGGGGAAGCTACAAGGGAAACAGCAAGAGTTACTCGGCATTTGGGCACGTTGTGGGACCAATAGGTCTGGACAGCAAAGTGGAGATATAAGAAAAGTTCTGGGTGAAAAAAATAGGACAGTGTTCCAGATCCCCCTTCCACTGCATTTTTATACATAGCTCACTATCAGGGGCTCAGCTCACAGATTCTTTGTATTAGGATTTATTTTTTGGTTCAGATTAGACCAGATCTGATCAGATATGTTTCCTGATCTTGAAAAGTTGCCTTAGAGTGGAGGTCAGGTCTTGGAAAGATTTTCAGGGGCATTGCTTTTGCTCTACTATCACAAAGCCAGAACAACAGGGGGGGTATTATATTGTGATTGCATACGGAAGTGGATAAGGGTTGAATATGGAGGCCAGCGCTGGGCTGGTTGCTGGCTCTCACAACAGAAACGAGCTTGTTGTCATCAGGCCTGATCGCGAAGTTGGGCCGAAGCCATTACAGCATTTGAGTGGCCAAACATGCCAGATTTGTAGCGATGAGATTGGTCTCACAGTCGATGGAGAGCTTTTTGTGGCCTGCAATGAGTGCGCATTCCCAATATGCCGGCCCTGCTATGAGTATGAACGCAGCGACGGCAATCAGGTCTGCCCTCAATGTAAAACCAGATACAAGAGGCATAAAGGAAGTCCGAGAGTCGAGGGAGATGAGGACGAGGATGATGTGGATGATTTGGAAAATGAGTTTGATTTTGGGGATCGTGATAAGCAAGATATGCAGTACAGTGTGGAGTCCATGCTTCATGGGCATATGAGCTATGGCCGGGGAGGGGATATGGAAATGCCTCAAGTAAGGCAGACAATGTTGCCGCAAGTCCCATTGCTTACAAATGGCCAGATGGATCCTGGGATACCTCCTGAACATCATGCCCTGATTGTACCTCAATTTATGGGAGGAGGGAAACGAGTTCATCCTCTTCCCTACGGGGATTCAAACTTTCCAGTACAACCAAGGTCGATGGATCCTACCAAGGATTTGGCAGTTTACGGATATGGAAGCGTAGCCTGGAAAGAGCGGGTTGAGAATTGGAAGAGGAGGCAGGATAAAATGCAGGTTATGAGGAGTGATGGAGGAATGCTACCAGGAGGGAAGGATGGGGATCCCGATGGCAATGGAGATGGACCTGATCTACCTCTGATGGATGAAGCAAGACAGCCTTTGTCAAGAAAGCTGCCAATCCCCTCGAGCAGAATAAATCCATACAGATTGATTATCATTCTTCGGCTTGTAGTTCTGGGCTTCTTTTTCCAATATCGAATTCTTCATCCTGTCACAGATGCATACGCGTTGTGGTTGACTTCAGTCATCTGTGAAATATGGTTTGCACTTTCCTGGATCCTTGATCAGTTTCCAAAATGGCTTCCCATTGAACGGGAAACATATCTAGACAGATTATCATTGAGGTATGAAAAGGAGGGTCAACCTTCTCGTCTTGCTGCGGTCGATCTATTTGTCAGTACTGTTGATCCATTGAAGGAACCTCCTTTAATCACTGCAAACACTGTGTTATCTATCCTTGCAGTGGATTATCCTGTAGACAAAGTTTCCTGTTATGTTTCAGATGATGGTGCAGCCATGCTAACATTTGAAGCCCTATCTGAAACTTCAGAGTTTGCAAAGAAGTGGGTTCCTTTCTGCAAGAAGTTTAACATTGAGCCCCGTGCACCAGAGTGGTACTTTGTTCAGAAGATAGACTATCTCAAGGACAAAGTACAACCTTCCTTTGTGAAAGAACGGAGGGCAATGAAGAGAGAGTATGAAGAATTCAAGGTTCGTATTAATGCTTTGGTAGCTAAAGCACAGAAGGTTCCAGATGAAGGCTGGACGATGCAGGATGGAACTCCTTGGCCTGGAAACAATGTGCGGGACCATCCAGGAATGATTCAGGTATTTTTGGGTCATAGTGGTGGGCACGACACTGATGGGAATGAACTGCCTCGCCTGGTCTATGTTTCACGTGAAAAGAGGCCTGGATTCAATCACCATAAGAAGGCTGGTGCAATGAATTCTTTGGTGCGGGTGTCAGCAGTTTTGACAAATGCTCCATATCTTTTAAATGTGGATTGCGATCATTATATAAACAACAGTAAAGCAATTCGTGAATCAATGTGTTTCATGATGGATCCCACATTGGGAAAGAAGGTCTGCTATGTGCAGTTCCCTCAGAGGTTTGATGGTATTGATAGCCATGATAGATATGCCAATCGCAATACTGTGTTCTTTGATATAAACATGAAAGGTCTGGATGGAATACAGGGACCTATATATGTTGGTACAGGTTGTGTTTTCCGAAGACAAGCTCTCTATGGATATGATGCACCCAAAAAGGAGAAGGCCTCTGGAAATACATGCAACTGCTGTCCGAAATGGTGCTGCTGTGGGTGTTGTCTGTCACGGAAGAAAAACAGGAAAACAAAACCAAAGCAAGAGAAGAAAAAGAAGAAATCAAAGCGCAATGATACCTCTTCACCTATTTTTAATTTAGAGGACATAGAAGAGGGAGTTGAAGGGATAGACAGTGAAAAATCATCATTGATGTCTCAAAAGAATTTTGAAAAGAGATTTGGGCAGTCACCTGTATTTGTTTCATCTACTCTTTTGGAGAATGGTGGTGTACCAAAAAATGCAACTCCTGCATCCCTCTTGAATGAGGCCATTCATGTTATAAGCTGTGGTTACGAAGATAAAACAGAATGGGGAAAAGAGGTTGGGTGGATATATGGTTCAGTCACAGAGGATATTTTGACTGGTTTCAAAATGCACTGCCATGGATGGCGTTCTATTTACTGTATCCCTTTAAGACCAGCATTCAAGGGATCTGCTCCAATTAATCTCTCAGATCGGCTCCATCAAGTGTTGCGTTGGGCTCTTGGATCAGTAGAAATTTTCCTGAGCAAGCATTGCCCCATTTGGTATGGATACGGAGGCGGGTTGAAATGGCTGGAAAGACTGTCTTATATAAATGCAACTGTGTATCCATTGACATCCTTACCCCTGTTAGCTTATTGTACCTTGCCTGCTGTATGTTTGCTCACTGGAAAATTTATAATTCCAGAGATTAGCAATTATGCTAGTTTGTGGTTTATTGCTCTCTTTGTGTGTATCATTACAACTGGTGTTTTGGAGATGCGATGGAGTGGGGTTGGTATTGATGATTGGTGGAGAAATGAGCAGTTTTGGGTGATTGGTGGTGTGTCAGCCCATCTTTTTGCTCTCTTTCAAGGATTGCTGAAGGTACTTGCTGGTGTTGACACAAATTTCACTGTAACATCTAAAGGAGGAGATGACGGAGAGTTTTCAGAACTCTATTTATTCAAGTGGACAAATCTCTTGATCCCCCCAACAACATTACTTGTAATTAATATTATTGGTGTGGTTGCTGGGGTATCTGATGCTATTAACAATGGTTATGCTTCATGGGGTCCTTTGTTTGGGAAAATGTTCTTTGCATTCTGGGTGATTGTACATTTATATCCTTTCCTGAAAGGTTTGATGGGGAAGCAGAATCGCACACCTACAATTGTAATTGTGTGGTCTGTTCTTCTTGCTTCTCTTTTCTCACTTATCTGGGTTCGGGTTAATCCATTCATTGGTAGGTCAGATGGACCCGTGCTGGAAGAATGTGGCTTAGACTGCAACGATTATTAAGGTGTTTGAGCAAATGCTGATTCCAGATGTCAATTGAGAGCTGTCCAGAATTTTATGTCACAAAAGATTCAGTTTTTCTGCTTTTGGGGAACAGACCAGAATGTTGAGTTATCATAAAATGTGACAACTCAACAATAGCACAGTGTAGGCAACTAGCCCATGAGATTTGTAGATTGTGGGAAAAAGGGCAGTTTCTGCAAGTCTTGCCAGGTAAACAAAGAATATTGGTGCAGGTCCAAGGGTGGTGCCAAATCTTGATAAGGCAAAGGCAAAGGCTTGCCCTCTGTAGTTTATTGTTATCAAAGTATTCTTTGATGTCTTAGTGAAGTAGACAGTTATACCTTCGTTTGGTGAAATTTCTCTTACAAGTGGTCGAAGATTTTTTTAGGCAATCACAAAACAGAACTCATGGTTCTACTAGTTTGTGAAAGGCGTCAACATTGTGCATATTTATTCAATTGACCTGGCATTTATTTCTTTACAATAAAGGGCAGATTTTTGCCTTCCTTTGTCATATATGCAAGGAAGTAAGAGGGGCCATTAATTGGCTGACTGTATCGTTACTGCTGTTAGATTAGTGTAGCTTTTTGGAGTAGATGGTGCTTGTTTGGTGTCTTAAATTTGGGTGTCCGGGGCAGTGATATCTGGGGCAATCACAGATTGTAACTTTTATGGCTACGGGTCAGTTTCGGATTCTCCTGATTTATTATGGCGAGAACCTAACTATCTCGCTACTGGACACTCTTGCTATTTAACATATAAATTCTAGAAATAAGATTGATTTATTCATCGTAACCAG

Ace file of the UniGene sp_v3.0_unigene16130

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Family 2 glycosyltransferase n=1 Tax=Selaginella moellendorffii RepID=D8QXH9_SELML	-	-	75%
FL-Next	tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis).	-	-	72%
Sma3	Cellulose synthase	-	-	-

Source	ECs	Term	Type	e value	Identity
Sma3	Cellulose synthase (UDP-forming).	EC:2.4.1.12	-	0.0	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Starch and sucrose metabolism	00500		0.0	%

Source	Gene names
Sma3	ATHA; ATHB; At2g21770; At2g25540; At3g03050; At4g18780; At4g32410; At4g39350; At5g05170; At5g09870; At5g16910; At5g17420; At5g44030; At5g64740; CESA09; CESA1; CESA10; CESA11; CESA13; CESA2; CESA3; CESA4; CESA5; CESA6; CESA7; CESA8; CESA9; CEV1; CSLD2; CSL

Source	GOs	Term	Type	Identity
Sma3	Golgi membrane	GO:0000139	Cellular Component	-
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	endoplasmic reticulum	GO:0005783	Cellular Component	-
Sma3	Golgi apparatus	GO:0005794	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	cellulose synthase complex	GO:0010330	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	integral to Golgi membrane	GO:0030173	Cellular Component	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	cellulose synthase (UDP-forming) activity	GO:0016760	Molecular Function	-
Sma3	defense response	GO:0006952	Biological Process	-
Sma3	response to osmotic stress	GO:0006970	Biological Process	-
Sma3	cellular cell wall organization	GO:0007047	Biological Process	-
Sma3	response to cold	GO:0009409	Biological Process	-
Sma3	response to water deprivation	GO:0009414	Biological Process	-
Sma3	primary cell wall biogenesis	GO:0009833	Biological Process	-
Sma3	secondary cell wall biogenesis	GO:0009834	Biological Process	-
Sma3	positive regulation of abscisic acid biosynthetic process	GO:0010116	Biological Process	-
Sma3	rhamnogalacturonan I side chain metabolic process	GO:0010400	Biological Process	-
Sma3	cell growth	GO:0016049	Biological Process	-
Sma3	cellulose biosynthetic process	GO:0030244	Biological Process	-
Sma3	hyperosmotic salinity response	GO:0042538	Biological Process	-
Sma3	defense response to bacterium	GO:0042742	Biological Process	-
Sma3	cortical microtubule organization	GO:0043622	Biological Process	-
Sma3	root hair elongation	GO:0048767	Biological Process	-
Sma3	defense response to fungus	GO:0050832	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Pyridine nucleotide-disulphide oxidoreductase, class-II	IPR000103	-	-
Sma3	WD40 repeat	IPR001680	-	-
Sma3	Zinc finger, RING-type	IPR001841	-	-
Sma3	Lipocalin	IPR002345	-	-
Sma3	Cellulose synthase	IPR005150	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	Zinc finger, RING-type, conserved site	IPR017907	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-
Sma3	Gonadotropin, beta subunit, conserved site	IPR018245	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-
Sma3		IPR019782	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G39350.1	CESA2, ATH-A, ATCESA2 cellulose synthase A2 chr4:18297078-18301890 FORWARD LENGTH=1084	73%
RefSeq	Arabidopsis thaliana	NP_195645.1	cellulose synthase A catalytic subunit 2 [UDP-forming] [Arabidopsis thaliana]	73%
RefSeq	Populus trichocarpa	XP_002330207.1	predicted protein [Populus trichocarpa]	77%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: Q4VWW7

Fln msg:

Fln protein: MEASAGLVAGSHNRNELVVIRPDREVGPKPLQHLSGQTCQICSDEIGLTVDGELFVACNECAFPICRPCYEYERSDGNQVCPQCKTRYKRHKGSPRVEGDEDEDDVDDLENEFDFGDRDKQDMQYSVESMLHGHMSYGRGGDMEMPQVRQTMLPQVPLLTNGQMDPGIPPEHHALIVPQFMGGGKRVHPLPYGDSNFPVQPRSMDPTKDLAVYGYGSVAWKERVENWKRRQDKMQVMRSDGGMLPGGKDGDPDGNGDGPDLPLMDEARQPLSRKLPIPSSRINPYRLIIILRLVVLGFFFQYRILHPVTDAYALWLTSVICEIWFALSWILDQFPKWLPIERETYLDRLSLRYEKEGQPSRLAAVDLFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYFVQKIDYLKDKVQPSFVKERRAMKREYEEFKVRINALVAKAQKVPDEGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGGHDTDGNELPRLVYVSREKRPGFNHHKKAGAMNSLVRVSAVLTNAPYLLNVDCDHYINNSKAIRESMCFMMDPTLGKKVCYVQFPQRFDGIDSHDRYANRNTVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKEKASGNTCNCCPKWCCCGCCLSRKKNRKTKPKQEKKKKKSKRNDTSSPIFNLEDIEEGVEGIDSEKSSLMSQKNFEKRFGQSPVFVSSTLLENGGVPKNATPASLLNEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSIYCIPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSKHCPIWYGYGGGLKWLERLSYINATVYPLTSLPLLAYCTLPAVCLLTGKFIIPEISNYASLWFIALFVCIITTGVLEMRWSGVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKGGDDGEFSELYLFKWTNLLIPPTTLLVINIIGVVAGVSDAINNGYASWGPLFGKMFFAFWVIVHLYPFLKGLMGKQNRTPTIVIVWSVLLASLFSLIWVRVNPFIGRSDGPVLEECGLDCNDY*

Protein Length: 1101

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTCTCGCGTTACCCACCTGGCTTTTGTCTTTAAAAACACATTCATGGATTCGGTAGAGCCCGGGAGGAAAGCAAAATGAGGCACAGCCACGCGGTTGTGTCAAACCAGTTGTACTGATTTTGTGGGAGGGCTGTACAGCTAGTTTAGATTTGGTGGTGGTGGGTTTTCCTACTCGGGCAGGAAATCGTGGGTGGGTTTGTGTATTTTTCGGGGGGCGTGAATTTGTTTGCAGGGCTGGCATCCATAGTGAGCGAGGGGAAGGGGAAGCTACAAGGGAAACAGCAAGAGTTACTCGGCATTTGGGCACGTTGTGGGACCAATAGGTCTGGACAGCAAAGTGGAGATATAAGAAAAGTTCTGGGTGAAAAAAATAGGACAGTGTTCCAGATCCCCCTTCCACTGCATTTTTATACATAGCTCACTATCAGGGGCTCAGCTCACAGATTCTTTGTATTAGGATTTATTTTTTGGTTCAGATTAGACCAGATCTGATCAGATATGTTTCCTGATCTTGAAAAGTTGCCTTAGAGTGGAGGTCAGGTCTTGGAAAGATTTTCAGGGGCATTGCTTTTGCTCTACTATCACAAAGCCAGAACAACAGGGGGGGTATTATATTGTGATTGCATACGGAAGTGGATAAGGGTTGAAT_-_ATGGAGGCCAGCGCTGGGCTGGTTGCTGGCTCTCACAACAGAAACGAGCTTGTTGTCATCAGGCCTGATCGCGAAGTTGGGCCGAAGCCATTACAGCATTTGAGTGGCCAAACATGCCAGATTTGTAGCGATGAGATTGGTCTCACAGTCGATGGAGAGCTTTTTGTGGCCTGCAATGAGTGCGCATTCCCAATATGCCGGCCCTGCTATGAGTATGAACGCAGCGACGGCAATCAGGTCTGCCCTCAATGTAAAACCAGATACAAGAGGCATAAAGGAAGTCCGAGAGTCGAGGGAGATGAGGACGAGGATGATGTGGATGATTTGGAAAATGAGTTTGATTTTGGGGATCGTGATAAGCAAGATATGCAGTACAGTGTGGAGTCCATGCTTCATGGGCATATGAGCTATGGCCGGGGAGGGGATATGGAAATGCCTCAAGTAAGGCAGACAATGTTGCCGCAAGTCCCATTGCTTACAAATGGCCAGATGGATCCTGGGATACCTCCTGAACATCATGCCCTGATTGTACCTCAATTTATGGGAGGAGGGAAACGAGTTCATCCTCTTCCCTACGGGGATTCAAACTTTCCAGTACAACCAAGGTCGATGGATCCTACCAAGGATTTGGCAGTTTACGGATATGGAAGCGTAGCCTGGAAAGAGCGGGTTGAGAATTGGAAGAGGAGGCAGGATAAAATGCAGGTTATGAGGAGTGATGGAGGAATGCTACCAGGAGGGAAGGATGGGGATCCCGATGGCAATGGAGATGGACCTGATCTACCTCTGATGGATGAAGCAAGACAGCCTTTGTCAAGAAAGCTGCCAATCCCCTCGAGCAGAATAAATCCATACAGATTGATTATCATTCTTCGGCTTGTAGTTCTGGGCTTCTTTTTCCAATATCGAATTCTTCATCCTGTCACAGATGCATACGCGTTGTGGTTGACTTCAGTCATCTGTGAAATATGGTTTGCACTTTCCTGGATCCTTGATCAGTTTCCAAAATGGCTTCCCATTGAACGGGAAACATATCTAGACAGATTATCATTGAGGTATGAAAAGGAGGGTCAACCTTCTCGTCTTGCTGCGGTCGATCTATTTGTCAGTACTGTTGATCCATTGAAGGAACCTCCTTTAATCACTGCAAACACTGTGTTATCTATCCTTGCAGTGGATTATCCTGTAGACAAAGTTTCCTGTTATGTTTCAGATGATGGTGCAGCCATGCTAACATTTGAAGCCCTATCTGAAACTTCAGAGTTTGCAAAGAAGTGGGTTCCTTTCTGCAAGAAGTTTAACATTGAGCCCCGTGCACCAGAGTGGTACTTTGTTCAGAAGATAGACTATCTCAAGGACAAAGTACAACCTTCCTTTGTGAAAGAACGGAGGGCAATGAAGAGAGAGTATGAAGAATTCAAGGTTCGTATTAATGCTTTGGTAGCTAAAGCACAGAAGGTTCCAGATGAAGGCTGGACGATGCAGGATGGAACTCCTTGGCCTGGAAACAATGTGCGGGACCATCCAGGAATGATTCAGGTATTTTTGGGTCATAGTGGTGGGCACGACACTGATGGGAATGAACTGCCTCGCCTGGTCTATGTTTCACGTGAAAAGAGGCCTGGATTCAATCACCATAAGAAGGCTGGTGCAATGAATTCTTTGGTGCGGGTGTCAGCAGTTTTGACAAATGCTCCATATCTTTTAAATGTGGATTGCGATCATTATATAAACAACAGTAAAGCAATTCGTGAATCAATGTGTTTCATGATGGATCCCACATTGGGAAAGAAGGTCTGCTATGTGCAGTTCCCTCAGAGGTTTGATGGTATTGATAGCCATGATAGATATGCCAATCGCAATACTGTGTTCTTTGATATAAACATGAAAGGTCTGGATGGAATACAGGGACCTATATATGTTGGTACAGGTTGTGTTTTCCGAAGACAAGCTCTCTATGGATATGATGCACCCAAAAAGGAGAAGGCCTCTGGAAATACATGCAACTGCTGTCCGAAATGGTGCTGCTGTGGGTGTTGTCTGTCACGGAAGAAAAACAGGAAAACAAAACCAAAGCAAGAGAAGAAAAAGAAGAAATCAAAGCGCAATGATACCTCTTCACCTATTTTTAATTTAGAGGACATAGAAGAGGGAGTTGAAGGGATAGACAGTGAAAAATCATCATTGATGTCTCAAAAGAATTTTGAAAAGAGATTTGGGCAGTCACCTGTATTTGTTTCATCTACTCTTTTGGAGAATGGTGGTGTACCAAAAAATGCAACTCCTGCATCCCTCTTGAATGAGGCCATTCATGTTATAAGCTGTGGTTACGAAGATAAAACAGAATGGGGAAAAGAGGTTGGGTGGATATATGGTTCAGTCACAGAGGATATTTTGACTGGTTTCAAAATGCACTGCCATGGATGGCGTTCTATTTACTGTATCCCTTTAAGACCAGCATTCAAGGGATCTGCTCCAATTAATCTCTCAGATCGGCTCCATCAAGTGTTGCGTTGGGCTCTTGGATCAGTAGAAATTTTCCTGAGCAAGCATTGCCCCATTTGGTATGGATACGGAGGCGGGTTGAAATGGCTGGAAAGACTGTCTTATATAAATGCAACTGTGTATCCATTGACATCCTTACCCCTGTTAGCTTATTGTACCTTGCCTGCTGTATGTTTGCTCACTGGAAAATTTATAATTCCAGAGATTAGCAATTATGCTAGTTTGTGGTTTATTGCTCTCTTTGTGTGTATCATTACAACTGGTGTTTTGGAGATGCGATGGAGTGGGGTTGGTATTGATGATTGGTGGAGAAATGAGCAGTTTTGGGTGATTGGTGGTGTGTCAGCCCATCTTTTTGCTCTCTTTCAAGGATTGCTGAAGGTACTTGCTGGTGTTGACACAAATTTCACTGTAACATCTAAAGGAGGAGATGACGGAGAGTTTTCAGAACTCTATTTATTCAAGTGGACAAATCTCTTGATCCCCCCAACAACATTACTTGTAATTAATATTATTGGTGTGGTTGCTGGGGTATCTGATGCTATTAACAATGGTTATGCTTCATGGGGTCCTTTGTTTGGGAAAATGTTCTTTGCATTCTGGGTGATTGTACATTTATATCCTTTCCTGAAAGGTTTGATGGGGAAGCAGAATCGCACACCTACAATTGTAATTGTGTGGTCTGTTCTTCTTGCTTCTCTTTTCTCACTTATCTGGGTTCGGGTTAATCCATTCATTGGTAGGTCAGATGGACCCGTGCTGGAAGAATGTGGCTTAGACTGCAACGATTATTAA___GGTGTTTGAGCAAATGCTGATTCCAGATGTCAATTGAGAGCTGTCCAGAATTTTATGTCACAAAAGATTCAGTTTTTCTGCTTTTGGGGAACAGACCAGAATGTTGAGTTATCATAAAATGTGACAACTCAACAATAGCACAGTGTAGGCAACTAGCCCATGAGATTTGTAGATTGTGGGAAAAAGGGCAGTTTCTGCAAGTCTTGCCAGGTAAACAAAGAATATTGGTGCAGGTCCAAGGGTGGTGCCAAATCTTGATAAGGCAAAGGCAAAGGCTTGCCCTCTGTAGTTTATTGTTATCAAAGTATTCTTTGATGTCTTAGTGAAGTAGACAGTTATACCTTCGTTTGGTGAAATTTCTCTTACAAGTGGTCGAAGATTTTTTTAGGCAATCACAAAACAGAACTCATGGTTCTACTAGTTTGTGAAAGGCGTCAACATTGTGCATATTTATTCAATTGACCTGGCATTTATTTCTTTACAATAAAGGGCAGATTTTTGCCTTCCTTTGTCATATATGCAAGGAAGTAAGAGGGGCCATTAATTGGCTGACTGTATCGTTACTGCTGTTAGATTAGTGTAGCTTTTTGGAGTAGATGGTGCTTGTTTGGTGTCTTAAATTTGGGTGTCCGGGGCAGTGATATCTGGGGCAATCACAGATTGTAACTTTTATGGCTACGGGTCAGTTTCGGATTCTCCTGATTTATTATGGCGAGAACCTAACTATCTCGCTACTGGACACTCTTGCTATTTAACATATAAATTCTAGAAATAAGATTGATTTATTCATCGTAACCAG

Fln Alignment:

Contig16130___MEASAGLVAGSHNRNELVVIRPDREVGPKPLQHLSGQTCQICSDEIGLTVDGELFVACNECAFPICRPCYEYERSDGNQVCPQCKTRYKRHKGSPRVXXXXXXXXXXXXXXXXXFGDRDKQDMQYSVESMLHGHMSYGRGGDMEMPQVRQTMLPQ--VPLLTNGQMDPGIPP----EHHALIVPQFMGG-GKRVHPLPYGDSNFPVQPRSMDPTKDLAVYGYGSVAWKERVENWKRRQDK--MQVMRSXXXXXXXXXXXXXXXXXXXXXXXXXXEARQPLSRKLPIPSSRINPYXXXXXXXXXXXGFFFQYRILHPVTDAYALWLTSVICEIWFALSWILDQFPKWLPIERETYLDRLSLRYEKEGQPSRLAAVDLFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYFVQKIDYLKDKVQPSFVKERRAMKREYEEFKVRINALVAKAQKVPDEGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGGHDTDGNELPRLVYVSREKRPGFNHHKKAGAMNSLVRVSAVLTNAPYLLNVDCDHYINNSKAIRESMCFMMDPTLGKKVCYVQFPQRFDGIDSHDRYANRNTVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKEKASGNTXXXXXXXXXXXXXLSRXXXXXXXXXXXXXXXXXXRNDTSSPIF-NLEDIEEGVEGIDSEKSSLMSQKNFEKRFGQSPVFVSSTLLENGGVPKNATPASLLNEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSIYCIPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSKHCPIWYGYGGGLKWLERLSYINATVYPLTSLPLLAYCTLPAVCLLTGKFIIPEISNYASLWFIALFVCIITTGVLEMRWSGVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKGGDD-GEFSELYLFKWTNLLIPPTTLLVINIIGVVAGVSDAINNGYASWGPLFGKMFFAFWVIVHLYPFLKGLMGKQNRTPTIVIVWSVLLASLFSLIWVRVNPFIGRSDGPVLEECGLDC
Q4VWW7_______________MEARTNTAAGSNKRNVRVSVRDDGELGPKPPQHINSHICQICGEDVGLAADGEFFVACNECAFPVCRPCYEYEWKDGNQSCPQCKTRYKWHKGSPQVDGDKEDECADDLDHDFNSTQGNRNEKQQIAEAMLHWQMAYGRGEDVGPSRSESQELPQLQVPLITNGQAISGELPAGSSEYRRIAAPPTGGGSGKRVHPLPFPDSTQTGQVRAEDPAKDFNSYGFGNVAWKERVESWKNKQDKNTLQVTSDTYYASEGKDGDIDGCVADEEDLQMSDEARQPLSRKVPIASSKINPYRMVIVLRLVILCFFFRYRILNPVRNAYGLWFTSVICEIWFAISWILDQFPKWLPINRETYLDRLCLRYDREGEPSQLAAVDIFVSTVDPMKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFVKKFDIEPRAPEWYFAQKIDYLKDKVQPSFVKERRAMKREYEEFKVRINALVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFEHHKKAGAMNSLVRVSAVLTNGPYMLNLDCDHYINNSRALREAMCFMMDPTLGKKVCYVQFPQRFDGIDRNDRYANHNTVFFDINLKGLDGIQGPVYVGTGCVFNRQALYGYEPPHKGKIHFSSCCG-----------PRKKSRKSNKKYNDTKKLDRPTDSTVPIFSSLEDIEGGVEGFDDEKSPLVFQKSLEKKFGQSLVFVASTQMENGGVPQSATPADLLKEAIHVISCGYEDKSDWGKEIGWIYGSVTEDILTGFKMHARGWRSIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYTGRLKWLERLAYINTTVYPITSIPLLAYCTLPAICLLTGKFIIPEISTLASLWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGVDTNFTVTSKASDEGGDFAELYIIKWTALLIPPTTLLIINIVGVVAGISYAISTGYRSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTTRIKGPDLQQCGINC

SNPs (tot: 43)

Position	A %	C %	G %	T %	Probability
204	80			20	0.995493
205		20	80		0.995493
207	80			20	0.995493
208	80		20		0.995493
210		20		80	0.995493
212			80	20	0.995493
216		20	80		0.995493
219			80	20	0.995493
220		20	80		0.995493
1188	11	88			0.923564
1189	11	88			0.923564
1193	88			11	0.923564
1259			88	11	0.923564
1382	10		90		0.90298
1407	87			12	0.992554
1469		22	66	11	0.999999
1472			77	22	0.999999
1475			14	85	0.993533
1573		12		87	0.992554
1697		90		10	0.90298
1831	88			11	0.923564
2165	13		80	6	0.999961
2166		13	86		0.999973
2169			86	13	0.999973
3259	14		85		0.993533
3262	14		71		0.984337
3263	14		85		0.993533
3327		80		20	0.995493
3353	16			83	0.994512
3354	16		83		0.994512
3356	83		16		0.994512
3376	16			83	0.994512
3377		16		83	0.994512
3380	83			16	0.994512
3559	16			83	0.994512
3776		83		16	0.999991
4057	10			90	0.90298
4060			90	10	0.90298
4098	84		15		0.999986
4490		6		93	0.999453
4538		7		92	1.0
4775	20	20			0.99255
4776	50			50	1.0

SSRs (tot: 1)

Start position	End position	Sequence	Length
176	187	TGG TGG TGG TGG	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain