SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene14475

Length: 7876 nt

UniGene Fasta

>sp_v3.0_unigene14475
AGAGGCTATTAAACTTGGCCAAGGAATTCGAAGTGAAGATCCGTGCAACCTCTTTAGGCTTCATTATTTGTTCATTTACAGGCGGGAAGTCCAAGTTTCGATTAGTCACTCCTCGAACCTTTATTATATCTGTTTCTCTTCTGTCCATGGCAGCGTTGATGAGGCCGACGGAACCAATTGCCTAGGGTTGGAAGAAAGCAAATAACTAAATAAGGGTTTCTCCGCGAGATTTGAGAAAAGCAGGGTGGTTCAAAATGCCGCTCTTCGTCTCAGACGCGGAGCTGCAAGAGGCAGCCAATAGCTGCAATATCTCTGTTATTGTTCAGAAAGCGGACGCGTACATCCGCGAGTTACAACAACAGCTGGAAACATCAAAGGCCCAGGGTGACGCTACCGCCATTACCGCAGAACAGAACTGTGCTCTTCTCGAGCAGAAATATATTTCACTTTCTGGTCAATTTTCGCAGATAGAGAATGAGAAGTCGCAGCTCACCGCGGCTCTGGACAAGCGGGCCACTGAACTTGCTCAAGTTCAGGCGCAGACACACAAGCTTGAGCTTGGAGCGATTAAAAAGGATGGTGAAGTTGAGCGCTTATCTCTTGAAGTCAATGAGCTACACAAATCAAAGAGGGAGTTATTGGAAGTTCTGGAGCATAAAAGCACTGAGCTTAATGAGAAAAATAACTTGATCAAAAACTATTTGGACAAGATTGTTGCCCTAACAGATGAGCGTAGTGCTCTTCAAGCCAAATTGCATGAAAATGAAGCAGAACTTGCCCGCTCACGCACGACACAGGCTCGCCTTTTACAGGAGAAGGAGCTCACTGAGAAGCACAACACCTGGTTAAATGAGGAGTTAACATCTAAAGTGGATGCAATTCTAAAGCAGCGCCAAACCAGTGCAGAAATAGAGGCAGATCTTTCTGCTAAACTTGCAGATGCTGAAAGTAAAGGAACTGAATCTCTGGCAGCACTACAGAGGAGTAAAGATAAAGTGAAGGATCTGGAAGAAAAGCTGGCATCCACAAGAGAGGAGCTGCAATTCACTAAAGAAGATGCTGCTATCAAGGAGGACCATCTTTCAGCTGAAGTTGCAACAGCTTCCAAGCTTGCAGATTTATACAAGCAGAGCTCTGAGGAGTGGCGTCAGAAGGCAAATGAGCTCGACGGTGTCATCAAAGCTTTAGAAACTCATTTAAATCAGGTTGAAGCTGATTATAAAGATAAGCTTCAGAAAGAATACTCAACACGAGAGGAGTTAGCAAAGGAGAGTGCAGAATTAAAGGAGAAGCTGGATAAAATGCGAGCGGAGATTGAGGCCCTCAAAGCTCAAAAGGATTGTGATTCACTTGCATTGGTCACTTACTCAAGTGATAGAAATATGGACCAATTGTCAAACATGGACACAGACACTATGTTGGAACTCCATAGAGATGGGATTGTTGTTCCAAGGATTCCACCAGGAATATCTGGAACAGCTTTAGCGGCTTCTCTAATAAGAGATGGCTGGAGTCTGGCAAAGATTTATACCAAGTATCAAGAAGCTGTTGATGCATGGCGGCATGAGAGGCAAGCGTGCAAACATTCACAAGCTATTTTGGAACGGGTTTTACATGAGATAGAAGAAAAGGCAGAAGTAATTTTAGATGAAAGAGCTGAACATGCCAGGATGATTGAGTCCTATATTGTAATGGAACAGAAGCTGCACCAATCTATGAATGATCAAGGAAATCTAGAAAACTCTATAATGCATCTGAAGGCTGATTTGCGGAAGAGGGAGCGGGAATACAGTATCGCCCTAAAAGAAATCCAGGACCTTCAAGCCCAGGTGGCAGTGCTTTTAAAAGAATGCGGAGACATTCAACTGCGATTTGGTATTAGTGAAGGCGTTTCTAAAGATGATGCTATTATTAATGCTGTTCCTCAGGACCACAATGAAACTGCAGTTGACAAAGTGATTTCTGATAGGCTTTTAACATTCAAGGATATTCATGGAATGGTGGAACAAAATTGTCAGCTTCGTAGCTTAGTGCGTACTCTTGCCCATCAGAATGAACAAAGAGAACAAGAGATCAAGGAGGCATTTGACTTTGAGCTTAAGAAGCGTACCAATGAGGCAGCCTCCAAAGTTGCTGTCATTTTGAAAAAGTCTGAAGAGCAATCGAGTATGATCGAGTCACTCCAGGGCACTGTGGGAATGTATAAGAGGCTTTATGAGGAAGAGATCAGAAATCGATCTTTCTTTCAGTATCCTACGGAAGGTTCTCCAGGTGAGGGCAGGAATGATCTTCGGAAGCTTGTGGAAATTTCTCAGGAAACTACTCAGAAGATGCAGGATCAGTCTGCTGAAGAGATTAGGCGTCTAAAAGAAGATATAAAAGCAGCCAAGCATGAAGCCAATGCCCTACACTCTGAGCGTGACCGACTTCATTTGGAAGCAACCTATGCTCGTGAAAGGTTAAATTCATTTATGAGGGATTCAGAAAACCAGCGGAATGAGATGAATGCTATTCTGGCAAGGAATGTAGAGTTTTCCCAAATGATAACAGAGTATCAACGGAGATTGCGTGAAAGCTCTCAGAGTACTCAGGCAGCTGAGGAGCGTGCTCGGAGGTTTCAAATGGAGGTCTCTGTACTAGAACATGAAAAGGAAATCCTATCGAATGCAGAGAAAAGGGCATCAGAGGAAGTGATTCTATTGTCAGATAGAGTACACCGATTACAGGCTACTGTGGATACAATTCAGAATGTAGATGAAATTCGTGAGAGTTCAAGGCAAGCGGAAAGAAAGAGATTGGAAGATGACCTGAACCGTTTGCAAAGAGAATGGGTAGAAGAAAAAAAAGAGCTACAGGTGGAGCGGGAACATGTTCGGAATCTTACACTGGAGAGAGAGCAAACTGTAAAACAGGCAATGTCACAGGTTGAGTCCATGAGTAAGGATTTGGCTGATGCATTGCGAGCAGTGTCAGCAGCAGAAACAAGGGCAGGAGTTGCAGAGGCACGAAATTCAGATTTGGTGGCAGATCTTAGGAAAGCTGAAGACAAAGCATCTTGGAAAGTTATGGATACCAGTTCGCCAGTGGCTGAAGAGGAGGTTATCATGGAATTACAAAAGGCAAGAGAAGTAATAGAACACCTCAAGGAAGACCTACAAGCTTCCATCCAGCACACAGAACAATATAAGTGCATAGCACAGGCGAATGAGGATGCATTGCGGCAAATAGAAAGTGCTCATGAGCACTTCAAGACTGAGGCGGGAAAACTTAAGCAATCATTGGAGAGTGAAGTCTCTGCCTTAAAGAAAAGGATATCAGACTTAGAATTTGAAGTAACTGAGAAGGAAGTGGCAGCTGCATCAGCAATGGAAGAGAAAGAAAGAGTGCTTATCAATCTTTCTAAAGAAATGACAGCTATATCAGATGACAACCACTTGAAAACAGGACAATTAGAGGAGGCCCAAATTTGCATTACTGCCTTGAAAGCAGATTTGGAAAAGGAACACCAGAACTGGCGCACTGCTCAAAGCAACTATGAGAGGCAGGTCATTCTGCAGGGAGAAACAATTCAAGAATTGGGTAAAACCTCTAAATCATTGGCAACATTACAAGAGGAAGTATTGAGTTTGCGTAAAGTTGCGGAGACAGTGAAAGATGAATATGAATCTTCTAAAGTTTCATGGGAGATGGAGAAAGCATCCTTGCAGTCTTCAAGGATTGATGCTGAGAAGAAATACAAAGAAGTTGACGAGCAGAATAAGCTCTTACTTGACCGTCTGGAGGCCATGCATATCAAGATAGCAGAGAAAGAAAGAAATGAAATGGGAACCACTGTACGTGGGCAGAGTGTCGATGACCAAGGTGAAAGTGATTTTCAAAATGTTATTCGTTATTTACGACGCTCGAAGGAAACAGCTGACACAGAAATTTCATTATTAAAGCAAGAGCGTATGCGGCTTCAGAAACAGCTTGAAAGTGCTCTTCGGGCGTCTGATATAGCACAAGCTGCATTACGCAAGGAACGGGAAAATATGCGGTCTGCTATTTATACAGATGAAGAGTTCAGTTCTCTGCAGTGCCAGGTAGCAGAAATAAACTTGTTAAGAGAAAGTAATGCACAGCTTAGAGATGAAAATAAGAGAAATTTTGAGGAATGCCAGGAATTGCGTGATAGACTTCAAAATGTACAGTTAGACACTGAAGAGCTACGTAAGTCTGTGAGAGAGAAGGACATTGAGTTGGATGCAGCTCAAAAAGAGCTGGAAATGCAGAAAATGGAGACAAGGCGTTGGGAAAACAGAGTCTCTAAGTTGTTGGAGAAGCACAAGACAATTGATGTGGAGCACTACGAACATATCAAGGTCGAGCTGCAACAACTTCAGGAGAAATCGGAAGCTATGACCACAGAAGTGGATATGGGGAGAAAATTGATAGCAGAAAAGCAAAAAAGAATATCAAATTTGGAGGAAGAGGTTGTCTCTACAGAGGTCAAGTTGTCTGAAATGGAAAAGAAGCTTCAAGAAATTTCCCAGGTTGAGGCAACTCTTAAATCTGAAGCTGACAAGCATAAGAAGCATTCAATTTTACAGAAGAGAAGAGCTGACTCTTTGACTAAAGAGAAAGATGAGTTAAACAAGGAGAAACAGGCTTTGGTCAAACAGATTGAAGAAATGAGATCAAGCAAAAAGGTAGTGGAGCTCTCAAAGCAACAGGAGTCTATTATTCGTCAGGAGATGACAGCCCAGCATGAACAGGCTCTGAAGGATTCTGAAAACATGTTAAAGGAAAGAGATACAAGGATACAGATTTTAGAGAAGACACTCGAGAGAGAAAGGGAGGAATTGCGAAAGGAAAAATTGAAGCGGCAAAAAGATCAGAAGAGTTTTGTGGAAGTTGCTAAAAGGGCTGTCCAGGAAAAAAAGAGGTACTATGATGAATATAGAAGAATTAAATCTCTGCAAGGACATAGCATAGAGAAAAGTGGTTCAAGCTCTTGCGAGATTACGGCTTTAGATGAAAAGGCTGTGAGTTATTTTACTGCAGTGGATCATCTTGAAGAAATATCAAACTTAGTGGCCACAGATACTACAATTCGTTCTAGCACTATGGATGTTCCACCTTCATTTGAGTTATCTACTGGGGCAGGGGACGTTTTGCCTTGCATTCCTTCTACTTCAGGGAGTACACTGAATGCAGTTTCTATACCTTCTGGGAAAGTGAACCAAACTACTGGTAGTACATCTGCAATTAGTTCAGTAGCTGTCTCTAGTGCTGCACCAGTCACAACAACTACTATAACTGCTGCTCGACAGATACATCGGCAAGCATTAAGTACAAATCCCACATCTCAACATTTTACTCATGGATCAGGTGGAAGTACTGTTATCCCATCCTTGGTAAAAGGTACCGATGAGAAAGAGCAAAAGCTTCAACAGTTAAAAACCATGTTAGAGGAAAAAGAGAAATACTCGGAAAACTAGCAGGAAGATAATTCGACCTCGAATTGAACCCACTAATCAACAAGATTCCACAGTGGAAGCTGACGTATCTGAAATGGATGCTGACATTGCTGAGGATGTGAAAGGTGGAACGTCTTTAGAAGCAGAAATTCAAGGAGGTGTCTCTTTAACCATTTCCTCTGCTTCATTAGGAGAATCCATTGCAAGTTTGCCTTCCAGTTCTGGAACAGTTCCAGTAGCACCTGGTATCCGAAAACGTGTTGCCTCTATCTCACTTCCTGATGTACATGAAGAATCTACTGAACAAGGACTTAAATCAGAATTAGCACCACTTCAAAAGAAGGCAAGAGGTATGGATTTGCAGGAAGAGTTAAATGAAGAGAGTAATCCTTCATTTGAAAACATAGAAAATGCTTCTCGTATGGATATCACACAGGAACCAGAAGAAAGAGATGATGTGAATGAACCAGAGATGAAAGATGGTTCAAAGGAATCGCCTGAGAGAGTTAATGGTGGCACGGCGAATCTTGAAGCAGAAGATTCTATTTCCAAATGGCCTCGTATAGCTAAGGTAGATGATTCTAAATCTGAGAAGCAACCACTTACTGATTTGAAAGGATCGTCAGATGCTAAACCTGCAGTGCAGCAATCCTATGAGTCAGAAATCCCATTAGTTTCTACAGAAAAGTTAAGGGAAGTGGAAGAAACCATTGAGACAAGTGGATATCAGGCTCCCATGGACGACTCTAGTGAAGCCATAGAGAAACTTGAATCTCCTGCACAGCTGGAAGATGTGGCAGAAGACAGTGACATGCACCAATCAAACAAGCTGGAATCTTCTGCCATGACTTTCTCATTTGTTGAGTTTCCTTCTGGAGGTGATGACATTGGCAAGCAACAAGATACAGGTATGCTAATTGTGGATTCATTTGATAATGTTGATCCAAATGCTTCTGTCCTTAAGGAATCTGAGGCTGAAGCAGTCCAGTCAGTTGGCCTGGATACCGAAAATGACAAAAATACTCTAAAGAATAGCTCTCTAGAGGCTGTTGAAAGTGGTCAAATGTCAGATGTACCGCCAGATACTGAAGAGGGAGAAATCACTGTTGAAGAGGGAGATATTGAGGATGAGGATAAGACATGAAATGCATGAAGGCTTGACACAGGAACTGGGCTTTCCATCTGAAGAGCTTGCAGAATTTCCAGATCAACATGATGCCGACTTGGATCGAACATCTCAGCAGAACTACCATGCAGGAGGATCAGGTCAAAGTTCTCAAACGGTTCCAACAGTTAAGAACACTCCACAGCATTGGATCAACGTGTTCTGCAGGTTCCTGTTGTTAATGCTTCTGAAGTTTTAACTGTTGAGGATAAGGGGAAGGTTGATGTGATAGTCTCATCTAGTGAATCAGTAGAGGAAACAGCACGACCTGCTACAAGGAATACCACCATTAACTTGGCTGATAGGGCAAGAGAGAGGGGACGCATCAGAGAGAGAGATAGACGTGTTGATATGCCATCACCTTCAGTCTCTAGAGGTCGTGGTAGAATTGGAAGGGGCACAAAGAGAGGAGTAGGTTCAGCCCGTGGACGTGGCTCTACTGCAGATGATTCACAAGGGAAGTAGGGTCTTTATCAATGCGGGTTCAGTTGTTATGCACAATCTTCTCCAAATAGTTGAATTACATTTTAAGCTACTTCGTGCCAGCTATGCTATATTTTGGTGCAATGACTGGGTAATGGCCTATTTTTGGAGGGTTTTTCAAGATGGCTGAGGAATTAAACTTACATTTTGTAAGGCCATTTTCTTAGTTGGATTCGAACTGAGATGTCCGCTTTGAAATTGAGCGTTGTAAAATAAAGACTTTCTAGGGAGATAAACTGGTTACATGTAGCACATCCTGTTCTTTGGAAAAGTGAGAAATTTAATCTTTTATGGGCGTAGGCAATGAGTCTTTTCTGATAGAAATGGATCCATTTTTCTACTGTGTGTGAAACAATTATTTATCTGAAGAATACATTTTTTTAGATAATGTTCTGGCTAGGCACTTTTTTCAATTACATGCAAGTCAACCTTTTTGGGAAGAATAAGGGCATGCTGTTGGTAAATGAAGTGCTGACAACAATCTACAGATCTATGGTATCAAATAGCAGGATCAGATATCGGCAGAACTTATCTTTTTTCTATGGTCAAACATGTCTTGTTGGTAGGACTATTTGTAGATATCAATCAAGTTGTTTGGAACAAATCGAAGCGTTGTTCCTTGTTAAAAAGGTGTTTCTTGAATTTGAAGGAAAATGTATAAAACATATTTCAACCTCCACAGATATATGTGGTACTAGATTCAGGTTACAAGATTGTATAAATGTACGAAATATTCAATTTTAAGTGAAGACGAGCCTTTTGGATTTAA

Ace file of the UniGene sp_v3.0_unigene14475

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	nucleoprotein TPR [Arabidopsis thaliana] sp\|A4GSN8.1\|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb\|ABO21684.1\| nuclear-pore anchor [Arabidopsis thaliana] gb\|AEE36226.1\| nucleoprotein TPR [A	-	-	0.0	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%
Sma3	YUP8H12R.9	-	-	8.772e-06	-

Source	Gene names
Sma3	Os02g0741500; P0516G10.28; P0585G03.6; PHYPADRAFT_113891; VITISV_006234; YUP8H12R.11; YUP8H12R.8; YUP8H12R.9;

Source	GOs	Term	Type	e value	Identity
Sma3	nuclear pore	GO:0005643	Cellular Component	0.0	-
Sma3	protein import into nucleus	GO:0006606	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Tetratricopeptide, MLP1/MLP2-like	IPR012929	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Arabidopsis thaliana	NP_178048.2	nucleoprotein TPR [Arabidopsis thaliana]	0.0	45%
RefSeq	Populus trichocarpa	XP_002312219.1	predicted protein [Populus trichocarpa]	0.0	47%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NXI2

Fln msg:

Fln protein: MLLSRRTIFQLKLQQLPSLQIYTSRALRSGVRRQMSSTVSSKL*

Protein Length: 45

Fln nts: AGAGGCTATTAAACTTGGCCAAGGAATTCGAAGTGAAGATCCGTGCAACCTCTTTAGGCTTCATTATTTGTTCATTTACAGGCGGGAAGTCCAAGTTTCGATTAGTCACTCCTCGAACCTTTATTATATCTGTTTCTCTTCTGTCCATGGCAGCGTTGATGAGGCCGACGGAACCAATTGCCTAGGGTTGGAAGAAAGCAAATAACTAAATAAGGGTTTCTCCGCGAGATTTGAGAAAAGCAGGGTGGTTCAAAATGCCGCTCTTCGTCTCAGACGCGGAGCTGCAAGAGGCAGCCAATAGCTGCAATATCTCTGTTATTGTTCAGAAAGCGGACGCGTACATCCGCGAGTTACAACAACAGCTGGAAACATCAAAGGCCCAGGGTGACGCTACCGCCATTACCGCAGAACAGAACTGTGCTCTTCTCGAGCAGAAATATATTTCACTTTCTGGTCAATTTTCGCAGATAGAGAATGAGAAGTCGCAGCTCACCGCGGCTCTGGACAAGCGGGCCACTGAACTTGCTCAAGTTCAGGCGCAGACACACAAGCTTGAGCTTGGAGCGATTAAAAAGGATGGTGAAGTTGAGCGCTTATCTCTTGAAGTCAATGAGCTACACAAATCAAAGAGGGAGTTATTGGAAGTTCTGGAGCATAAAAGCACTGAGCTTAATGAGAAAAATAACTTGATCAAAAACTATTTGGACAAGATTGTTGCCCTAACAGATGAGCGTAGTGCTCTTCAAGCCAAATTGCATGAAAATGAAGCAGAACTTGCCCGCTCACGCACGACACAGGCTCGCCTTTTACAGGAGAAGGAGCTCACTGAGAAGCACAACACCTGGTTAAATGAGGAGTTAACATCTAAAGTGGATGCAATTCTAAAGCAGCGCCAAACCAGTGCAGAAATAGAGGCAGATCTTTCTGCTAAACTTGCAGATGCTGAAAGTAAAGGAACTGAATCTCTGGCAGCACTACAGAGGAGTAAAGATAAAGTGAAGGATCTGGAAGAAAAGCTGGCATCCACAAGAGAGGAGCTGCAATTCACTAAAGAAG_-_ATGCTGCTATCAAGGAGGACCATCTTTCAGCTGAAGTTGCAACAGCTTCCAAGCTTGCAGATTTATACAAGCAGAGCTCTGAGGAGTGGCGTCAGAAGGCAAATGAGCTCGACGGTGTCATCAAAGCTTTAG___AAACTCATTTAAATCAGGTTGAAGCTGATTATAAAGATAAGCTTCAGAAAGAATACTCAACACGAGAGGAGTTAGCAAAGGAGAGTGCAGAATTAAAGGAGAAGCTGGATAAAATGCGAGCGGAGATTGAGGCCCTCAAAGCTCAAAAGGATTGTGATTCACTTGCATTGGTCACTTACTCAAGTGATAGAAATATGGACCAATTGTCAAACATGGACACAGACACTATGTTGGAACTCCATAGAGATGGGATTGTTGTTCCAAGGATTCCACCAGGAATATCTGGAACAGCTTTAGCGGCTTCTCTAATAAGAGATGGCTGGAGTCTGGCAAAGATTTATACCAAGTATCAAGAAGCTGTTGATGCATGGCGGCATGAGAGGCAAGCGTGCAAACATTCACAAGCTATTTTGGAACGGGTTTTACATGAGATAGAAGAAAAGGCAGAAGTAATTTTAGATGAAAGAGCTGAACATGCCAGGATGATTGAGTCCTATATTGTAATGGAACAGAAGCTGCACCAATCTATGAATGATCAAGGAAATCTAGAAAACTCTATAATGCATCTGAAGGCTGATTTGCGGAAGAGGGAGCGGGAATACAGTATCGCCCTAAAAGAAATCCAGGACCTTCAAGCCCAGGTGGCAGTGCTTTTAAAAGAATGCGGAGACATTCAACTGCGATTTGGTATTAGTGAAGGCGTTTCTAAAGATGATGCTATTATTAATGCTGTTCCTCAGGACCACAATGAAACTGCAGTTGACAAAGTGATTTCTGATAGGCTTTTAACATTCAAGGATATTCATGGAATGGTGGAACAAAATTGTCAGCTTCGTAGCTTAGTGCGTACTCTTGCCCATCAGAATGAACAAAGAGAACAAGAGATCAAGGAGGCATTTGACTTTGAGCTTAAGAAGCGTACCAATGAGGCAGCCTCCAAAGTTGCTGTCATTTTGAAAAAGTCTGAAGAGCAATCGAGTATGATCGAGTCACTCCAGGGCACTGTGGGAATGTATAAGAGGCTTTATGAGGAAGAGATCAGAAATCGATCTTTCTTTCAGTATCCTACGGAAGGTTCTCCAGGTGAGGGCAGGAATGATCTTCGGAAGCTTGTGGAAATTTCTCAGGAAACTACTCAGAAGATGCAGGATCAGTCTGCTGAAGAGATTAGGCGTCTAAAAGAAGATATAAAAGCAGCCAAGCATGAAGCCAATGCCCTACACTCTGAGCGTGACCGACTTCATTTGGAAGCAACCTATGCTCGTGAAAGGTTAAATTCATTTATGAGGGATTCAGAAAACCAGCGGAATGAGATGAATGCTATTCTGGCAAGGAATGTAGAGTTTTCCCAAATGATAACAGAGTATCAACGGAGATTGCGTGAAAGCTCTCAGAGTACTCAGGCAGCTGAGGAGCGTGCTCGGAGGTTTCAAATGGAGGTCTCTGTACTAGAACATGAAAAGGAAATCCTATCGAATGCAGAGAAAAGGGCATCAGAGGAAGTGATTCTATTGTCAGATAGAGTACACCGATTACAGGCTACTGTGGATACAATTCAGAATGTAGATGAAATTCGTGAGAGTTCAAGGCAAGCGGAAAGAAAGAGATTGGAAGATGACCTGAACCGTTTGCAAAGAGAATGGGTAGAAGAAAAAAAAGAGCTACAGGTGGAGCGGGAACATGTTCGGAATCTTACACTGGAGAGAGAGCAAACTGTAAAACAGGCAATGTCACAGGTTGAGTCCATGAGTAAGGATTTGGCTGATGCATTGCGAGCAGTGTCAGCAGCAGAAACAAGGGCAGGAGTTGCAGAGGCACGAAATTCAGATTTGGTGGCAGATCTTAGGAAAGCTGAAGACAAAGCATCTTGGAAAGTTATGGATACCAGTTCGCCAGTGGCTGAAGAGGAGGTTATCATGGAATTACAAAAGGCAAGAGAAGTAATAGAACACCTCAAGGAAGACCTACAAGCTTCCATCCAGCACACAGAACAATATAAGTGCATAGCACAGGCGAATGAGGATGCATTGCGGCAAATAGAAAGTGCTCATGAGCACTTCAAGACTGAGGCGGGAAAACTTAAGCAATCATTGGAGAGTGAAGTCTCTGCCTTAAAGAAAAGGATATCAGACTTAGAATTTGAAGTAACTGAGAAGGAAGTGGCAGCTGCATCAGCAATGGAAGAGAAAGAAAGAGTGCTTATCAATCTTTCTAAAGAAATGACAGCTATATCAGATGACAACCACTTGAAAACAGGACAATTAGAGGAGGCCCAAATTTGCATTACTGCCTTGAAAGCAGATTTGGAAAAGGAACACCAGAACTGGCGCACTGCTCAAAGCAACTATGAGAGGCAGGTCATTCTGCAGGGAGAAACAATTCAAGAATTGGGTAAAACCTCTAAATCATTGGCAACATTACAAGAGGAAGTATTGAGTTTGCGTAAAGTTGCGGAGACAGTGAAAGATGAATATGAATCTTCTAAAGTTTCATGGGAGATGGAGAAAGCATCCTTGCAGTCTTCAAGGATTGATGCTGAGAAGAAATACAAAGAAGTTGACGAGCAGAATAAGCTCTTACTTGACCGTCTGGAGGCCATGCATATCAAGATAGCAGAGAAAGAAAGAAATGAAATGGGAACCACTGTACGTGGGCAGAGTGTCGATGACCAAGGTGAAAGTGATTTTCAAAATGTTATTCGTTATTTACGACGCTCGAAGGAAACAGCTGACACAGAAATTTCATTATTAAAGCAAGAGCGTATGCGGCTTCAGAAACAGCTTGAAAGTGCTCTTCGGGCGTCTGATATAGCACAAGCTGCATTACGCAAGGAACGGGAAAATATGCGGTCTGCTATTTATACAGATGAAGAGTTCAGTTCTCTGCAGTGCCAGGTAGCAGAAATAAACTTGTTAAGAGAAAGTAATGCACAGCTTAGAGATGAAAATAAGAGAAATTTTGAGGAATGCCAGGAATTGCGTGATAGACTTCAAAATGTACAGTTAGACACTGAAGAGCTACGTAAGTCTGTGAGAGAGAAGGACATTGAGTTGGATGCAGCTCAAAAAGAGCTGGAAATGCAGAAAATGGAGACAAGGCGTTGGGAAAACAGAGTCTCTAAGTTGTTGGAGAAGCACAAGACAATTGATGTGGAGCACTACGAACATATCAAGGTCGAGCTGCAACAACTTCAGGAGAAATCGGAAGCTATGACCACAGAAGTGGATATGGGGAGAAAATTGATAGCAGAAAAGCAAAAAAGAATATCAAATTTGGAGGAAGAGGTTGTCTCTACAGAGGTCAAGTTGTCTGAAATGGAAAAGAAGCTTCAAGAAATTTCCCAGGTTGAGGCAACTCTTAAATCTGAAGCTGACAAGCATAAGAAGCATTCAATTTTACAGAAGAGAAGAGCTGACTCTTTGACTAAAGAGAAAGATGAGTTAAACAAGGAGAAACAGGCTTTGGTCAAACAGATTGAAGAAATGAGATCAAGCAAAAAGGTAGTGGAGCTCTCAAAGCAACAGGAGTCTATTATTCGTCAGGAGATGACAGCCCAGCATGAACAGGCTCTGAAGGATTCTGAAAACATGTTAAAGGAAAGAGATACAAGGATACAGATTTTAGAGAAGACACTCGAGAGAGAAAGGGAGGAATTGCGAAAGGAAAAATTGAAGCGGCAAAAAGATCAGAAGAGTTTTGTGGAAGTTGCTAAAAGGGCTGTCCAGGAAAAAAAGAGGTACTATGATGAATATAGAAGAATTAAATCTCTGCAAGGACATAGCATAGAGAAAAGTGGTTCAAGCTCTTGCGAGATTACGGCTTTAGATGAAAAGGCTGTGAGTTATTTTACTGCAGTGGATCATCTTGAAGAAATATCAAACTTAGTGGCCACAGATACTACAATTCGTTCTAGCACTATGGATGTTCCACCTTCATTTGAGTTATCTACTGGGGCAGGGGACGTTTTGCCTTGCATTCCTTCTACTTCAGGGAGTACACTGAATGCAGTTTCTATACCTTCTGGGAAAGTGAACCAAACTACTGGTAGTACATCTGCAATTAGTTCAGTAGCTGTCTCTAGTGCTGCACCAGTCACAACAACTACTATAACTGCTGCTCGACAGATACATCGGCAAGCATTAAGTACAAATCCCACATCTCAACATTTTACTCATGGATCAGGTGGAAGTACTGTTATCCCATCCTTGGTAAAAGGTACCGATGAGAAAGAGCAAAAGCTTCAACAGTTAAAAACCATGTTAGAGGAAAAAGAGAAATACTCGGAAAACTAGCAGGAAGATAATTCGACCTCGAATTGAACCCACTAATCAACAAGATTCCACAGTGGAAGCTGACGTATCTGAAATGGATGCTGACATTGCTGAGGATGTGAAAGGTGGAACGTCTTTAGAAGCAGAAATTCAAGGAGGTGTCTCTTTAACCATTTCCTCTGCTTCATTAGGAGAATCCATTGCAAGTTTGCCTTCCAGTTCTGGAACAGTTCCAGTAGCACCTGGTATCCGAAAACGTGTTGCCTCTATCTCACTTCCTGATGTACATGAAGAATCTACTGAACAAGGACTTAAATCAGAATTAGCACCACTTCAAAAGAAGGCAAGAGGTATGGATTTGCAGGAAGAGTTAAATGAAGAGAGTAATCCTTCATTTGAAAACATAGAAAATGCTTCTCGTATGGATATCACACAGGAACCAGAAGAAAGAGATGATGTGAATGAACCAGAGATGAAAGATGGTTCAAAGGAATCGCCTGAGAGAGTTAATGGTGGCACGGCGAATCTTGAAGCAGAAGATTCTATTTCCAAATGGCCTCGTATAGCTAAGGTAGATGATTCTAAATCTGAGAAGCAACCACTTACTGATTTGAAAGGATCGTCAGATGCTAAACCTGCAGTGCAGCAATCCTATGAGTCAGAAATCCCATTAGTTTCTACAGAAAAGTTAAGGGAAGTGGAAGAAACCATTGAGACAAGTGGATATCAGGCTCCCATGGACGACTCTAGTGAAGCCATAGAGAAACTTGAATCTCCTGCACAGCTGGAAGATGTGGCAGAAGACAGTGACATGCACCAATCAAACAAGCTGGAATCTTCTGCCATGACTTTCTCATTTGTTGAGTTTCCTTCTGGAGGTGATGACATTGGCAAGCAACAAGATACAGGTATGCTAATTGTGGATTCATTTGATAATGTTGATCCAAATGCTTCTGTCCTTAAGGAATCTGAGGCTGAAGCAGTCCAGTCAGTTGGCCTGGATACCGAAAATGACAAAAATACTCTAAAGAATAGCTCTCTAGAGGCTGTTGAAAGTGGTCAAATGTCAGATGTACCGCCAGATACTGAAGAGGGAGAAATCACTGTTGAAGAGGGAGATATTGAGGATGAGGATAAGACATGAAATGCATGAAGGCTTGACACAGGAACTGGGCTTTCCATCTGAAGAGCTTGCAGAATTTCCAGATCAACATGATGCCGACTTGGATCGAACATCTCAGCAGAACTACCATGCAGGAGGATCAGGTCAAAGTTCTCAAACGGTTCCAACAGTTAAGAACACTCCACAGCATTGGATCAACGTGTTCTGCAGGTTCCTGTTGTTAATGCTTCTGAAGTTTTAACTGTTGAGGATAAGGGGAAGGTTGATGTGATAGTCTCATCTAGTGAATCAGTAGAGGAAACAGCACGACCTGCTACAAGGAATACCACCATTAACTTGGCTGATAGGGCAAGAGAGAGGGGACGCATCAGAGAGAGAGATAGACGTGTTGATATGCCATCACCTTCAGTCTCTAGAGGTCGTGGTAGAATTGGAAGGGGCACAAAGAGAGGAGTAGGTTCAGCCCGTGGACGTGGCTCTACTGCAGATGATTCACAAGGGAAGTAGGGTCTTTATCAATGCGGGTTCAGTTGTTATGCACAATCTTCTCCAAATAGTTGAATTACATTTTAAGCTACTTCGTGCCAGCTATGCTATATTTTGGTGCAATGACTGGGTAATGGCCTATTTTTGGAGGGTTTTTCAAGATGGCTGAGGAATTAAACTTACATTTTGTAAGGCCATTTTCTTAGTTGGATTCGAACTGAGATGTCCGCTTTGAAATTGAGCGTTGTAAAATAAAGACTTTCTAGGGAGATAAACTGGTTACATGTAGCACATCCTGTTCTTTGGAAAAGTGAGAAATTTAATCTTTTATGGGCGTAGGCAATGAGTCTTTTCTGATAGAAATGGATCCATTTTTCTACTGTGTGTGAAACAATTATTTATCTGAAGAATACATTTTTTTAGATAATGTTCTGGCTAGGCACTTTTTTCAATTACATGCAAGTCAACCTTTTTGGGAAGAATAAGGGCATGCTGTTGGTAAATGAAGTGCTGACAACAATCTACAGATCTATGGTATCAAATAGCAGGATCAGATATCGGCAGAACTTATCTTTTTTCTATGGTCAAACATGTCTTGTTGGTAGGACTATTTGTAGATATCAATCAAGTTGTTTGGAACAAATCGAAGCGTTGTTCCTTGTTAAAAAGGTGTTTCTTGAATTTGAAGGAAAATGTATAAAACATATTTCAACCTCCACAGATATATGTGGTACTAGATTCAGGTTACAAGATTGTATAAATGTACGAAATATTCAATTTTAAGTGAAGACGAGCCTTTTGGATTTAA

Fln Alignment:

Contig14475___MLLSRRTIFQLKLQQLPSLQIYTSRALRSGVRRQMSSTVSS
A9NXI2_______________MRLSRRSIFQLKLQQLASLQIYTSRALKSHVRRQMNLTVSS

SNPs (tot: 78)

Position	A %	C %	G %	T %	Probability
185			66	33	0.997452
189			33	66	0.997452
224	33	66			0.997452
261	25		75		0.996473
294	50		50		1.0
297		75		25	0.996473
1601			16	83	0.994512
1773	25			75	0.996473
1774	25			75	0.996473
1777		75		25	0.996473
1840			50	50	1.0
1971	33			66	0.997452
1975			66	33	0.997452
2093	20	80			0.995493
2096			20	80	0.995493
2178	16			83	0.994512
2254		20		80	0.995493
2337			83	16	0.994512
2338	83			16	0.994512
2459	16	83			0.994512
2461		83		16	0.994512
2511		25	75		0.996473
2514			75	25	0.996473
2534	66		33		0.997452
3436		20		80	0.995493
3924	20	80			0.995493
3926			80	20	0.995493
3927		80	20		0.995493
3978	80		20		0.995493
4039	87		12		0.992554
4040	87		12		0.992554
4041	87		12		0.992554
4089	12		87		0.992554
4090		87		12	0.992554
4091		87	12		0.992554
4092	87		12		0.992554
4417	75		25		0.996473
4459	75			25	0.996473
4460	75		25		0.996473
4462	75		25		0.996473
4543		40	60		1.0
4905	14			85	0.993533
4924	25		75		0.996473
5798		83		16	0.994512
5832	16		83		0.994512
5862	11			88	0.923564
5863	11			88	0.923564
5864		88		11	0.923564
5865	88		11		0.923564
6231	83		16		0.994512
6268	20		80		0.995493
6271			80	20	0.995493
6272	80			20	0.995493
6508	16			83	0.994512
6509		83		16	0.994512
6551	16		83		0.994512
6616			66	33	1.0
6651	20			80	0.995493
6652	20	80			0.995493
6653		80		20	0.995493
6654	80		20		0.995493
6775	50			33	1.0
6779	33	66			1.0
6914		87	12		0.992554
6915	87		12		0.992554
6916	87		12		0.992554
6927		87		12	0.992554
6981	85		14		0.993533
7062		81		18	0.999994
7067	18		81		0.999994
7068	81	18			0.999994
7070			81	18	0.999994
7076		81	18		0.999994
7081		18	81		0.999994
7082	18	81			0.999994
7296			10	90	0.90298
7297		90	10		0.90298
7504	14			85	0.993533

SSRs (tot: 1)

Start position	End position	Sequence	Length
3805	3817	AGAA AGAA AGAA A	13

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain