SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene10378

Length: 843 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene10378

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam02458, Transferase, Transferase family	-	-	0.0	34%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	78%

Source	InterPros	Term	Type	e value	Identity
Sma3	Transferase	IPR003480	-	0.0	-

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LMI0

Fln msg: STOP codon was not found. Distance to subject end: 12 aas, your sequence is shorter than subject: 280 - 447

Fln protein: LSHCILDGLGFSQFLNAVAEIARGEPLLSVRPEWKRELLKPRCPPTVNFDHKEYGGDNPSRSCLIDVNAAGGLVQGSFVLTAQSLDNLKKNVLAAKTKDIDEEYLHCSTFEALAAFVWKSRVKALKIPCDEKVRLLFAVNVRKVYKPRPPEGYYGNGFFGACVEVSAKVVLEASLWDLVRMVKEEKARLTDEYLRSAIDFLELHDPKPKVGPPSATELYLSDWSRMGYSLVDFGWGEAVNVTPVSFPFVHVCIFVPPPNINTGDKRKNGIRVITCLPFEA

Protein Length: 281

Fln nts: CCTCTCGCACTGCATCCTTGACGGGCTAGGATTCTCACAATTTCTTAACGCAGTAGCTGAAATTGCCAGGGGAGAGCCCCTTCTATCTGTAAGGCCTGAATGGAAGAGAGAACTTCTTAAGCCACGATGCCCACCCACAGTCAACTTCGATCACAAAGAATATGGTGGCGATAACCCAAGCAGAAGTTGCCTCATCGACGTAAATGCTGCAGGAGGTCTAGTCCAGGGCTCATTTGTGCTCACTGCTCAATCTCTAGATAATCTCAAGAAGAATGTTTTAGCAGCCAAGACTAAAGATATTGATGAAGAGTATTTACATTGTTCAACATTTGAAGCCTTGGCCGCATTCGTGTGGAAATCAAGGGTGAAGGCTCTTAAAATTCCTTGTGATGAGAAAGTACGCCTTCTTTTTGCTGTAAACGTGAGAAAGGTGTACAAACCACGTCCCCCGGAGGGGTACTACGGTAACGGTTTCTTCGGTGCTTGCGTTGAGGTTTCTGCTAAAGTTGTATTGGAGGCTTCGCTTTGGGATCTAGTCAGAATGGTGAAGGAAGAGAAGGCGAGACTGACAGATGAATACCTTAGGTCTGCCATAGATTTTCTTGAGCTCCATGACCCTAAACCGAAAGTTGGGCCTCCTTCCGCAACAGAACTGTATTTGTCTGACTGGAGCCGCATGGGATACTCACTCGTGGATTTCGGCTGGGGTGAGGCGGTGAACGTGACTCCAGTGAGCTTTCCATTTGTTCATGTTTGCATTTTCGTTCCACCTCCCAATATAAATACAGGTGATAAGAGAAAAAATGGCATCAGAGTTATTACATGCTTGCCCTTTGAAGCAAT

Fln Alignment:

Contig10378___LSHCILDGLGFSQFLNAVAEIARGEPLLSVRPEWKRELLKPRCPPTVNFDHKEYGGDNPSRSCLIDVNAAGGLVQGSFVLTAQSLDNLKKNVLAAKTKDIDEEYLHCSTFEALAAFVWKSRVKALKIPCDEKVRLLFAVNVRKVYKPRPPEGYYGNGFFGACVEVSAKVVLEASLWDLVRMVKEEKARLTDEYLRSAIDFLELHDPKPKVGPPSATELYLSDWSRMGYSLVDFGWGEAVNVTPVSFPFVHVCIFVPPPNINTGDKRKNGIRVITCLPFEA
B8LMI0_______________VSHCMSDGLGFSQFLNAIADLARGAPLLSVTPVWKREILKPRSPPTVNFDHKEF------RSSVIDVTATGGPVPGSFLVTAQSLDKLKKNVLAGKMKD-DEQYLYCSTFEALAAFVWKSRVKALEISFDEEVRLYFAVNVRKLYRPPLPEGYYGNGFFGACVVASARVVREASLWDLVRMVKEEKARLTDEYLRSVIDFLDLHDPKPEVGPPSATELYLSDWSRMAFSQVDFGWGEAVNVTPANFPFVHACVFLPPPITNTDAKRKNGIRVITCLPSEA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain