SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene3164

Length: 4013 nt

UniGene Fasta

>sp_v3.0_unigene3164
TGCATATATCTACTTTCTGGTAATTGCTGCCTTGAATCAGCTTCCTTGGCTTGCAGTTTTTGGGAGGACTGTATCACTTTTCCCTCTTCTGTTTGTTTTATGTGTGACGGCCATCAAAGATGGGTATGAGGATTGGCGCAGGCATCGTTCTGATAAGAAAGAAAATAACAGGCCGGTAGAAGTGCTGCAGGGCGGTCAGTTTCAATACAAGAAGTGGAAGGATGTCAGGGTTGGAGAAGTTCTAAAGGTATATGCGACTGAAACAATTCCTTGTGATATGGTTTTGTTAGGAACAAGTGATCCGAGTGGAATTGCATATGTTCAGACCATTAATCTCGATGGGGAGTCAAATCTGAAAACCAGATATGCGAGGCAAGAGACTGCATCGAAGAAGCCTGAAACGGAACCTCCTTCGGGCATCATTCGTTGTGAACAACCAAACAGAAACATATATGGTTTTGTTGCGAACATGGAAGTTGAAGTTGGTGGGAGAAGCATTCCTCTTGTACCGTCCAATATTCTTCTCCGGGGTTGTCAGCTGAAAAATACTGATTGGGCAGTGGGGGTGGCTGTTTATGCTGGCAAAGAAACAAAAGCAATGCTGAATAGCTCAGGGACACCCTCGAAGAGAAGCAGATTGGAAGCATACATGAACAGAGAGACCTTGTGGTTGTCTGTCTTTCTATTCATTATGTGTGCAGTTGTTGCAATAGGAATGGGTCAGTGGCTAGAGCGGCACAGGGACCAACGTGACACTGGCTGTCCCCATATTTTAGGAAGAAGTATTTTACTAACGGTGATGACAATGGAGAGAGATGCAATTATTTTGGTGTACTCATGGAAATCCTTATCTCATTTCTGAGTTCTGTGATAGTTTTTCAAATAATGATTCCAATATCCCTATATATATCCATGGAATTGGTCCGTTTGGGGCAGTCGTATTTCATGATTGGGGATACAAAGATGTATGACAGCAATTCAAATTCAAGGTTCCAGTGTCGTTCATTAAATATAAATGAAGACTTAGGTCAAATAAAATATGTATTTTCTGATAAGACAGGTACTCTGACAGAGAACAAGATGGAATTTCGTAATGCAAGTATATATGGGGTGAATTACTGCAATGGGAAAGTTACGATGGACTCTGTGGGCCAAGAATCAACTGGCAGGCATGAAGAGAAGGAAAGCATCGCAGAAGTACTGGATAGACAGGTTTGGAGGCCAAAGATGGAGGTAAAAGTGGATGCTGAGCTTGTTCGGTTGTTAGGTAAAAGTTTTTCTACACAGGAGAGAAAGGTTGCACATGAATACTTCCTCACTATGGCAGCTTGCAATACAATAGTCCCTACCATAATAGAAGGTGAAGGATCGATTGATTATCAGGGGGAGTCTCCCGATGAACAGGCGCTGGTATCGGCTGCTGCTGCTTATGGATACGCCCTTATTGAGCGAACTTCTGGACACATTGTGATTGATATATTGGGTGAAAGACAAAGATTGGATGTGTTGGGATTGCATGAGTTTGACAGTGTGCGCAAAAGAATGTCAGTAGTAGTTCAATGTCCTGACAATACTGTGAAAGTTTTGGTAAAAGGGGCAGATAGTTCAATGCTTAATATTATGTCCAAAACTCCTAATAACAATCAAGTAACATATATGGAAGCAACAGAGAACCATCTGCATGAATATGCATCACAGGGTTTACGAACGCTTGTTGTGGGAGCAAAAAACCTCAGTGATGAAGAGCTTGAAGAATGGCAGCATTCTTATCAGGAAGCCAGTACAGCATTAATTGACAGGACATCATTGCTTAGGGAAGCTGCAAGTCTAATTGAATGCAATCTCAACCTACTAGGGGCCACAGGGATTGAAGATAAATTGCAAGATGGGGTCCCAGAAGCAATCGAATCATTGAGAGAAGCAGGGGTTAAGGTTTGGGTTCTGACTGGAGATAAGCAAGAAACTGCAATTTCTATTGGTCTTTCATGTAAGCTTCTTACTCATAATATGCAGCAGGTTATTATCAATGGCACCTCTAAAGATGTTTGCAAGAAACTTTTAGAAGAGGCAAAAGCTACATACAGAATAAGTCGAGTAGAGACAAGAAAAAGCTTTTCAAAAAGGCAGAAAAGTATTGATATTGCTCAGGCTGAGGGTATACAAGAAACTGAGGGTATACAGGCCTTTCCTGAGTCCAGGTCACATGTTATCAGACAGATTACAGATATCAATGATATCCCTAAGGACCATGGTATGGTAGGTGCAGCAGAGAGGCATCCACCCTTGGCACTTATAATTGATGGCGCCAGCCTTGTCTACATATTGGAAAGTGACTTGTTGGAGCAAGAGCTCTTTGATTTGGCAATATCATGTAGAGTAGTTCTTTGCTGTCGAGTTGCTCCTTTGCAAAAAGCTGGTGTTGTTGACCTCATAAAGAAAAGGACAAATGACATGACACTGGCCATTGGTGATGGAGCAAATGACGTTTCTATGATTCAGATGGCAGATGTTGGAGTAGGTATTAGTGGTCAAGAAGGACGGCAAGCTGTGATGGCATCAGATTTTGCTATGGGACAGTTTAAATTTTTGAAACGGTTATTACTTGTTCATGGTCATTGGAACTATCAACGTGTTGGGTATTTGGTGTTATACAACTTCTACCGCAATGCTGTTTTTGTTCTGATGCTTTTCTGGTATATATTGTACACAGCCTTTTCTACAACATCTGCCTTGACTGATTGGAGCAGCGTGTTCTATTCTGTCATCTATACTTCAGTGCCGACAATTGTAGTCGGCATTCTTGATAAAGATTTGAGTCACAAAACTCTGCTTAGCTATCCTAAACTTTATGGGTCTGGACACAGGCAGGAAAGTTACAACTTGCAACTTTTTTGGCTGACGATGGCCGATACGCTATGGCAAAGTCTTGTTCTTTTCTTTGTACCTTACTTATCATACGAGAACAGTACAATTGACATTTGGAGCATGGGGAGTTTGTGGACGATTGCAGTTGTTGTGTTAGTTAATGTTCATTTGTCAATGGATATTCAACGTTGGGCATTAATCACTCATGTTGCCGTATGGGGCTCGATTATTGTTACATATGCCTGTCTTCTTATCTTGGATTCACTGCCTGGACTTCCAAACTACTGGACAATATATCAAATAGCCAAGTCATCATCTTATTGGCTAAATATTATCCTTATAACTTTTTTAGCACTGCTCCCTCGCTTTCTTTTGAAAGTTTTGAAGCAAAGGTTCTGGCCTTCTGATATTCAGATAGCTCGAGAAGCAGAAATACTGAGAAAAACGCCTGGCCATTTGTCTGTGAAGCTGACTGAAACTAAAGATTTACCTGGGCACTAGATTTTATTGAGGATGGGGTTCATTTGTCCTGCCCAAGTAGCACTATATCAGCTAATAGCTTCTTTATCGAATGAAAATGTAGTGTGACAGTTCAAGTGCGATTGCAAAGGTACTATTTTCATATTCTGTCACCCTCATCTTGCATAGAATGCAGTTTCATATTACTGCAGTGGCTAATACCCTTTGTGTCTAATTGTGGCCGAATTAGTCAAATCAGTTGGCTGCAGCTTTATCTATTTTGATCTTGTGGGTTGTGTACAATCCAAAATTGTCTATGTATTTTATTTTCCAAAATTGTCCATTAGATGTTCAGTTTTGGATTGTGCAATCTCATTGCAAATTGATATGTAATTGTAGTTTCTTTAAGATATTTCCATGGAAAACTGAATGAGAGAAATGAATTTATCTGTATTCTTTTATTTTACTGCTGACACAGACTTCCATTTCCTTCATTACTCATTTGAGTAAATACAAGAAAATGACGAATTAAAGTATAGCTTATTTTGCTATTACTTACTCCTGAGAATATTTTTCCCTTTTGTATGTAGTACTGTGGAATTTTGCTCTTAGTATATGACAAGTGGCGAGATCTGTCAACATCTGTCTCTCTGGAGAAAGTACAATTCAAGAGATTGATCTATTGTAAT

Ace file of the UniGene sp_v3.0_unigene3164

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phospholipid-transporting atpase, putative n=1 Tax=Ricinus communis RepID=B9SRT5_RICCO	-	-	0.0	64%
FL-Next	sp=Phospholipid-transporting ATPase 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	65%
Sma3	Aminophospholipid ATPase	-	-	1.662e-16	-

Source	ECs	Term	Type	e value	Identity
Sma3	Phospholipid-translocating ATPase.	EC:3.6.3.1	-	4.989e-09	-

Source	Gene names
Sma3	ALA1; At5g04930; GSVIVT00001690001; GSVIVT00037502001; GSVIVT00037503001; LOC_Os03g20949; LOC_Os03g20958; LOC_Os03g20970; LOC_Os03g21680; MUG13.22; Os01g0277600; Os03g0326000; Os03g0326100; Os03g0326200; Os03g0334700; OsI_01386; OsI_11389; OsI_11390; OsI_

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	sequence-specific DNA binding transcription factor activity	GO:0003700	Molecular Function	-
Sma3	phospholipid-translocating ATPase activity	GO:0004012	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	GO:0015662	Molecular Function	-
Sma3	sequence-specific DNA binding	GO:0043565	Molecular Function	-
Sma3	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	-
Sma3	ATP biosynthetic process	GO:0006754	Biological Process	-
Sma3	phospholipid transport	GO:0015914	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter	IPR001757	-	-
Sma3	DNA-binding WRKY	IPR003657	-	-
Sma3	Haloacid dehalogenase-like hydrolase	IPR005834	-	-
Sma3	ATPase, P-type cation exchange, alpha subunit	IPR006069	-	-
Sma3	ATPase, P-type, phospholipid-translocating, flippase	IPR006539	-	-
Sma3	ATPase, P-type, ATPase-associated domain	IPR008250	-	-
Sma3	HAD superfamily hydrolase-like, type 3	IPR013200	-	-
Sma3	ATPase, P-type phosphorylation site	IPR018303	-	-
Sma3	Formate C-acetyltransferase glycine radical, conserved site	IPR019777	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G04930.1	ALA1 aminophospholipid ATPase 1 chr5:1445509-1449568 FORWARD LENGTH=1158	54%
RefSeq	Arabidopsis thaliana	NP_568146.1	phospholipid-transporting ATPase 1 [Arabidopsis thaliana]	54%
RefSeq	Populus trichocarpa	XP_002309187.1	aminophospholipid ATPase [Populus trichocarpa]	64%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: P98204

Fln msg: Separated hits, possible frame ERROR between 757 and 769, your sequence is shorter than subject: 1122 - 1158

Fln protein: AYIYFLVIAALNQLPWLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDKKENNRPVEVLQGGQFQYKKWKDVRVGEVLKVYATETIPCDMVLLGTSDPSGIAYVQTINLDGESNLKTRYARQETASKKPETEPPSGIIRCEQPNRNIYGFVANMEVEVGGRSIPLVPSNILLRGCQLKNTDWAVGVAVYAGKETKAMLNSSGTPSKRSRLEAYMNRETLWLSVFLFIMCAVVAIGMGQWLERHRDQRDxxxxxYFRKKYFTNGDDNGERCNYFGVLMEILISFLSSVIVFQIMIPISLYISMELVRLGQSYFMIGDTKMYDSNSNSRFQCRSLNINEDLGQIKYVFSDKTGTLTENKMEFRNASIYGVNYCNGKVTMDSVGQESTGRHEEKESIAEVLDRQVWRPKMEVKVDAELVRLLGKSFSTQERKVAHEYFLTMAACNTIVPTIIEGEGSIDYQGESPDEQALVSAAAAYGYALIERTSGHIVIDILGERQRLDVLGLHEFDSVRKRMSVVVQCPDNTVKVLVKGADSSMLNIMSKTPNNNQVTYMEATENHLHEYASQGLRTLVVGAKNLSDEELEEWQHSYQEASTALIDRTSLLREAASLIECNLNLLGATGIEDKLQDGVPEAIESLREAGVKVWVLTGDKQETAISIGLSCKLLTHNMQQVIINGTSKDVCKKLLEEAKATYRISRVETRKSFSKRQKSIDIAQAEGIQETEGIQAFPESRSHVIRQITDINDIPKDHGMVGAAERHPPLALIIDGASLVYILESDLLEQELFDLAISCRVVLCCRVAPLQKAGVVDLIKKRTNDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFKFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILYTAFSTTSALTDWSSVFYSVIYTSVPTIVVGILDKDLSHKTLLSYPKLYGSGHRQESYNLQLFWLTMADTLWQSLVLFFVPYLSYENSTIDIWSMGSLWTIAVVVLVNVHLSMDIQRWALITHVAVWGSIIVTYACLLILDSLPGLPNYWTIYQIAKSSSYWLNIILITFLALLPRFLLKVLKQRFWPSDIQIAREAEILRKTPGHLSVKLTETKDLPGH*

Protein Length: 1123

Fln nts: TGCATATATCTACTTTCTGGTAATTGCTGCCTTGAATCAGCTTCCTTGGCTTGCAGTTTTTGGGAGGACTGTATCACTTTTCCCTCTTCTGTTTGTTTTATGTGTGACGGCCATCAAAGATGGGTATGAGGATTGGCGCAGGCATCGTTCTGATAAGAAAGAAAATAACAGGCCGGTAGAAGTGCTGCAGGGCGGTCAGTTTCAATACAAGAAGTGGAAGGATGTCAGGGTTGGAGAAGTTCTAAAGGTATATGCGACTGAAACAATTCCTTGTGATATGGTTTTGTTAGGAACAAGTGATCCGAGTGGAATTGCATATGTTCAGACCATTAATCTCGATGGGGAGTCAAATCTGAAAACCAGATATGCGAGGCAAGAGACTGCATCGAAGAAGCCTGAAACGGAACCTCCTTCGGGCATCATTCGTTGTGAACAACCAAACAGAAACATATATGGTTTTGTTGCGAACATGGAAGTTGAAGTTGGTGGGAGAAGCATTCCTCTTGTACCGTCCAATATTCTTCTCCGGGGTTGTCAGCTGAAAAATACTGATTGGGCAGTGGGGGTGGCTGTTTATGCTGGCAAAGAAACAAAAGCAATGCTGAATAGCTCAGGGACACCCTCGAAGAGAAGCAGATTGGAAGCATACATGAACAGAGAGACCTTGTGGTTGTCTGTCTTTCTATTCATTATGTGTGCAGTTGTTGCAATAGGAATGGGTCAGTGGCTAGAGCGGCACAGGGACCAACGTGACACxxxxxxxxxxxxATATTTTAGGAAGAAGTATTTTACTAACGGTGATGACAATGGAGAGAGATGCAATTATTTTGGTGTACTCATGGAAATCCTTATCTCATTTCTGAGTTCTGTGATAGTTTTTCAAATAATGATTCCAATATCCCTATATATATCCATGGAATTGGTCCGTTTGGGGCAGTCGTATTTCATGATTGGGGATACAAAGATGTATGACAGCAATTCAAATTCAAGGTTCCAGTGTCGTTCATTAAATATAAATGAAGACTTAGGTCAAATAAAATATGTATTTTCTGATAAGACAGGTACTCTGACAGAGAACAAGATGGAATTTCGTAATGCAAGTATATATGGGGTGAATTACTGCAATGGGAAAGTTACGATGGACTCTGTGGGCCAAGAATCAACTGGCAGGCATGAAGAGAAGGAAAGCATCGCAGAAGTACTGGATAGACAGGTTTGGAGGCCAAAGATGGAGGTAAAAGTGGATGCTGAGCTTGTTCGGTTGTTAGGTAAAAGTTTTTCTACACAGGAGAGAAAGGTTGCACATGAATACTTCCTCACTATGGCAGCTTGCAATACAATAGTCCCTACCATAATAGAAGGTGAAGGATCGATTGATTATCAGGGGGAGTCTCCCGATGAACAGGCGCTGGTATCGGCTGCTGCTGCTTATGGATACGCCCTTATTGAGCGAACTTCTGGACACATTGTGATTGATATATTGGGTGAAAGACAAAGATTGGATGTGTTGGGATTGCATGAGTTTGACAGTGTGCGCAAAAGAATGTCAGTAGTAGTTCAATGTCCTGACAATACTGTGAAAGTTTTGGTAAAAGGGGCAGATAGTTCAATGCTTAATATTATGTCCAAAACTCCTAATAACAATCAAGTAACATATATGGAAGCAACAGAGAACCATCTGCATGAATATGCATCACAGGGTTTACGAACGCTTGTTGTGGGAGCAAAAAACCTCAGTGATGAAGAGCTTGAAGAATGGCAGCATTCTTATCAGGAAGCCAGTACAGCATTAATTGACAGGACATCATTGCTTAGGGAAGCTGCAAGTCTAATTGAATGCAATCTCAACCTACTAGGGGCCACAGGGATTGAAGATAAATTGCAAGATGGGGTCCCAGAAGCAATCGAATCATTGAGAGAAGCAGGGGTTAAGGTTTGGGTTCTGACTGGAGATAAGCAAGAAACTGCAATTTCTATTGGTCTTTCATGTAAGCTTCTTACTCATAATATGCAGCAGGTTATTATCAATGGCACCTCTAAAGATGTTTGCAAGAAACTTTTAGAAGAGGCAAAAGCTACATACAGAATAAGTCGAGTAGAGACAAGAAAAAGCTTTTCAAAAAGGCAGAAAAGTATTGATATTGCTCAGGCTGAGGGTATACAAGAAACTGAGGGTATACAGGCCTTTCCTGAGTCCAGGTCACATGTTATCAGACAGATTACAGATATCAATGATATCCCTAAGGACCATGGTATGGTAGGTGCAGCAGAGAGGCATCCACCCTTGGCACTTATAATTGATGGCGCCAGCCTTGTCTACATATTGGAAAGTGACTTGTTGGAGCAAGAGCTCTTTGATTTGGCAATATCATGTAGAGTAGTTCTTTGCTGTCGAGTTGCTCCTTTGCAAAAAGCTGGTGTTGTTGACCTCATAAAGAAAAGGACAAATGACATGACACTGGCCATTGGTGATGGAGCAAATGACGTTTCTATGATTCAGATGGCAGATGTTGGAGTAGGTATTAGTGGTCAAGAAGGACGGCAAGCTGTGATGGCATCAGATTTTGCTATGGGACAGTTTAAATTTTTGAAACGGTTATTACTTGTTCATGGTCATTGGAACTATCAACGTGTTGGGTATTTGGTGTTATACAACTTCTACCGCAATGCTGTTTTTGTTCTGATGCTTTTCTGGTATATATTGTACACAGCCTTTTCTACAACATCTGCCTTGACTGATTGGAGCAGCGTGTTCTATTCTGTCATCTATACTTCAGTGCCGACAATTGTAGTCGGCATTCTTGATAAAGATTTGAGTCACAAAACTCTGCTTAGCTATCCTAAACTTTATGGGTCTGGACACAGGCAGGAAAGTTACAACTTGCAACTTTTTTGGCTGACGATGGCCGATACGCTATGGCAAAGTCTTGTTCTTTTCTTTGTACCTTACTTATCATACGAGAACAGTACAATTGACATTTGGAGCATGGGGAGTTTGTGGACGATTGCAGTTGTTGTGTTAGTTAATGTTCATTTGTCAATGGATATTCAACGTTGGGCATTAATCACTCATGTTGCCGTATGGGGCTCGATTATTGTTACATATGCCTGTCTTCTTATCTTGGATTCACTGCCTGGACTTCCAAACTACTGGACAATATATCAAATAGCCAAGTCATCATCTTATTGGCTAAATATTATCCTTATAACTTTTTTAGCACTGCTCCCTCGCTTTCTTTTGAAAGTTTTGAAGCAAAGGTTCTGGCCTTCTGATATTCAGATAGCTCGAGAAGCAGAAATACTGAGAAAAACGCCTGGCCATTTGTCTGTGAAGCTGACTGAAACTAAAGATTTACCTGGGCACTAGATTTTATTGAGGATGGGGTTCATTTGTCCTGCCCAAGTAGCACTATATCAGCTAATAGCTTCTTTATCGAATGAAAATGTAGTGTGACAGTTCAAGTGCGATTGCAAAGGTACTATTTTCATATTCTGTCACCCTCATCTTGCATAGAATGCAGTTTCATATTACTGCAGTGGCTAATACCCTTTGTGTCTAATTGTGGCCGAATTAGTCAAATCAGTTGGCTGCAGCTTTATCTATTTTGATCTTGTGGGTTGTGTACAATCCAAAATTGTCTATGTATTTTATTTTCCAAAATTGTCCATTAGATGTTCAGTTTTGGATTGTGCAATCTCATTGCAAATTGATATGTAATTGTAGTTTCTTTAAGATATTTCCATGGAAAACTGAATGAGAGAAATGAATTTATCTGTATTCTTTTATTTTACTGCTGACACAGACTTCCATTTCCTTCATTACTCATTTGAGTAAATACAAGAAAATGACGAATTAAAGTATAGCTTATTTTGCTATTACTTACTCCTGAGAATATTTTTCCCTTTTGTATGTAGTACTGTGGAATTTTGCTCTTAGTATATGACAAGTGGCGAGATCTGTCAACATCTGTCTCTCTGGAGAAAGTACAATTCAAGAGATTGATCTATTGTAAT

Fln Alignment:

Contig3164___AYIYFLVIAALNQLPWLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDKKENNRPVEVLQGGQFQYKKWKDVRVGEVLKVYATETIPCDMVLLGTSDPSGIAYVQTINLDGESNLKTRYARQETASKKPETEPPSGIIRCEQPNRNIYGFVANMEVEVGGRSIPLVPSNILLRGCQLKNTDWAVGVAVYAGKETKAMLNSSGTPSKRSRLEAYMNRETLWLSVFLFIMCAVVAIGMGQWLERHRDQRDTxxxxYFRKKYFTNGDDNGERCNYFGVLMEILISFLSSVIVFQIMIPISLYISMELVRLGQSYFMIGDTKMYDSNSNSRFQCRSLNINEDLGQIKYVFSDKTGTLTENKMEFRNASIYGVNYCNGKVTMDSVGQESTGRHEEKESIAEVLDRQVWRPKMEVKVDAELVRLLGKSFSTQERKVAHEYFLTMAACNTIVPTIIEGEGS----IDYQGESPDEQALVSXXXXXXXXLIERTSGHIVIDILGERQRLDVLGLHEFDSVRKRMSVVVQCPDNTVKVLVKGADSSMLNIMSKTPNNNQVTYMEATENHLHEYASQGLRTLVVGAKNLSDEELEEWQHSYQEASTALIDRTSLLREAASLIECNLNLLGATGIEDKLQDGVPEAIESLREAGVKVWVLTGDKQETAISIGLSCKLLTHNMQQVIINGTSKDVCKKLLEEAKATYRISRVETRKSFSKRQKSIDIAQAEGIQETEGIQAFPESRSHVIRQITDINDIPKDHGMVGAAERHPPLALIIDGASLVYILESDLLEQELFDLAISCRVVLCCRVAPLQKAGVVDLIKKRTNDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFKFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILYTAFSTTSALTDWSSVFYSVIYTSVPTIVVGILDKDLSHKTLLSYPKLYGSGHRQESYNLQLFWLTMADTLWQSLVLFFVPYLSYENSTIDIWSMGSLWTIAVVVLVNVHLSMDIQRWALITHVAVWGSIIVTYACLLILDSLPGLPNYWTIYQIAKSSSYWLNIILITFLALLPRFLLKVLKQRFWPSDIQIAREAEIL
P98204______________AYIYFLVIAVLNQLPQLAVFGRGASIMPLAFVLLVSAIKDAYEDFRRHRSDRVENNRLALVFEDHQFREKKWKHIRVGEVIKVQSNQTLPCDMVLLATSDPTGVVYVQTTNLDGESNLKTRYAKQETLLKAADMESFNGFIKCEKPNRNIYGFQANMEID--GRRLSLGPSNIILRGCELKNTAWALGVVVYAGGETKAMLNNSGAPSKRSRLETRMNLEIILLSLFLIVLCTIAAATAAVWLRTHRDDLDTxxxxFYRRKDYSERP-GGKNYKYYGWGWEIFFTFFMAVIVYQIMIPISLYISMELVRIGQAYFMTNDDQMYDESSDSSFQCRALNINEDLGQIKYLFSDKTGTLTDNKMEFQCACIEGVDYSD----REPADSEHPGYSIEVDGI-------ILKPKMRVRVDPVLLQLTKTGKATEEAKRANEFFLSLAACNTIVPIVSNTSDPNVKLVDYQGESPDEQALVYAAAAYGFLLIERTSGHIVINVRGETQRFNVLGLHEFDSDRKRMSVILGCPDMSVKLFVKGADSSMFGVMDESYGG----VIHETKIQLHAYSSDGLRTLVVGMRELNDSEFEQWHSSFEAASTALIGRAGLLRKVAGNIETNLRIVGATAIEDKLQRGVPEAIESLRIAGIKVWVLTGDKQETAISIGFSSRLLTRNMRQIVINSN-------------------------SLDSCRRSLEEANAS----------------------------------IASNDESDNVALIIDGTSLIYVLDNDL-EDVLFQVACKCSAILCCRVAPFQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLILFWYVLFTCYTLTTAITEWSSVLYSVIYTAIPTIIIGILDKDLGRQTLLDHPQLYGVGQRAEGYSTTLFWYTMIDTIWQSAAIFFIPMFAYWGSTIDTSSLGDLWTIAAVVVVNLHLAMDVIRWNWITHAAIWGSIVAACICVIVIDVIPTLPGYWAIFQVGKTWMFWFCLLAIVVTSLLPRFAIKFLVEYYRPSDVRIAREAEKL

SNPs (tot: 68)

Position	A %	C %	G %	T %	Probability
759	33		33		0.997753
760	33	33			0.997753
768		25		50	0.995533
770	75		25		0.996473
774		25		75	0.996473
775		25		75	0.996473
781	75	25			0.996473
782	75			25	0.996473
785	75			25	0.996473
786		25	75		0.996473
787	25			75	0.996473
788	75	25			0.996473
790		25		75	0.996473
791	25			75	0.996473
922	80	20			0.995493
923			20	80	0.995493
925		20	80		0.995493
928	20	80			0.995493
930		20	80		0.995493
933			20	80	0.995493
935			80	20	0.995493
937			80	20	0.995493
940		20	80		0.995493
943	20		80		0.995493
1422	20	80			0.995493
1425		80	20		0.995493
1426			20	80	0.995493
2212	14		85		0.993533
2214			14	85	0.993533
2215	85		14		0.993533
2216			14	85	0.993533
2294		66		33	0.997452
2373	83		16		0.994512
2374			16	83	0.994512
2375		83	16		0.994512
2444	85	14			0.993533
2446	85			14	0.993533
2447			85	14	0.993533
2578		25	75		0.996473
2580	75			25	0.996473
2586			25	75	0.996473
2588	75	25			0.996473
2589	75	25			0.996473
2592			25	75	0.996473
2593		25		75	0.996473
2596	75			25	0.996473
2597	75	25			0.996473
2600		25	75		0.996473
2601	25		75		0.996473
2667	25	75			0.996473
2668		75		25	0.996473
2670		75		25	0.996473
2754		57		42	1.0
2778			12	87	0.992554
2785	12	87			0.992554
2787		12	87		0.992554
2788	87			12	0.992554
2789		87		12	0.992554
2790	87		12		0.992554
2791	87		12		0.992554
2792		12		87	0.992554
2797		12	87		0.992554
2865	88		11		0.923564
2952		11		88	0.923564
2958	88	11			0.923564
2959			11	88	0.923564
3473	92		8		0.999718
3621			91	5	0.993509

SSRs (tot: 1)

Start position	End position	Sequence	Length
1417	1428	GCT GCT GCT GCT	12

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain