SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene2247

Length: 2311 nt

UniGene Fasta

>sp_v3.0_unigene2247
TCTTTGGTTTTAGTAATTTTATGCTCATTGAGCTTCTTAATGTGCACTATATCTGGATGCCTGAGACTGATCCGTGAACTGTACAGGGGAAAAAGTAATTGAAGATTTTTGAAGTATTATTTTTGGGTGGTGCTTTACATAACAATGGCTAGATCAGCGCATACTGTGAAAGAGATAGTGGATGAGATTATGAGACTGCATAGATCTCTACCTCCTAGGCCTAGTCATGAGGAAGTTGAGGCTGCTCTTGCCCTGGTAAAGGATGTGCAAAATAGAGAACAGTCTCGCTTAGAAACGGTTCAACAACAACCCAAACCCCCTGATGTGCCAGACGAATTATTCTCTGTATTGCAGGAGATGCAGAAGAATCTCATTTTTTTACAGAGCAAGGAGGAAAAAGGCGAAGCATTAGCCCTTCTTGATTTGGAGCAGTGCCATTGTCTGTTCGATGATTTGCTACAAAAGGCCGCTGGGAGTCTTTCTCACATCGACCAAGGTAATTCAAGGCCTTCTGCGGTCTCATCTTTTCATCCAAATGGAGTTCGAGAGCTCGGGAATGGTGAAGAGTGTTTTCTGAAACACTTGGAACTTAAGAAAAATCAGGAGATGGGCGGTATTCCACAGTATAGTAAAGATGATAGTTTTATCCAAAAAACAAAAGAGTCACATTCGGAAATGAGAATTTTAGGATCAGAAAAAGACAAAGTTTCGCTGCCAATTTCCAAAGAAAAATATTCTTCTGAAACAGGGGACGATGGACAAAAACTCAGTCTAATAAAAATTGCCAGCCTTATTGAAGCAACTGCGAAGAAAGGTGCTGAGAGTTTGGATCTTCGAGGAAGATTAGTGGAACAGCTTGAGTGGCTCCCTGATTCAATTGGAAAGCTTAGCAGTCTTGTCCAACTCAATTTGTCTGAGAACCATATTGTGACACTTCCTAGTTCCATAGGAAACCTTTCCAGCTTAACACGTCTAGATTTGCACTCAAATCAATTGTACAGTCTTCCTGATTCCATTGGGGAGCTTTCAAGCCTGACTGATCTAGATTTACACGGCAACCGCTTGAGGACATTGCCTGCCTCAACTGGGGATCTTTCCAGTCTTACAAATCTTAACCTGAGCGCAAATCAGCTGTCCTCATTACCAGAGTCTATTGGGAAGCTGACCAACTTGAAAAGCCTAAATGTAGAGACAAATGAGATAGAGGAACTGCCATATACAATTGGCCAATGTACTGCCCTTATTGAATTGCGAGCTGATTTCAATCACCTCAAGGCATTGCCAGAAGCAGTTGGAAAGCTTGTGTCTTTAGAGGTCCTAACACTGCACTATAACAGAATAAAGAGCCTGCCAACTACTATGGCTTCTTTATCGAGTTTGAAAGAACTTGATGTGAGCTTCAATGAATTGGAGTCAATACCTGAAAGCTTGTGCTTTGCTACAAGTCTTGTCAAACTGAATGTTGGCAGAAACTTTGCTGACTTGCAGTCACTTCCCCGGTCCATAGGCAACCTTGAAATGCTTGAGGAGTTGGATATTAGTAGCAATCAGATAAAGTTCCTTCCAGATTCATTTGCTATGCTTAGAAAACTTCGAGTGTTTAAAGTAGAAGAGACCCCACTTGAAGTGCCTCCAAGGCATATAGCTGAAATGGGAGCTCAGGCGGTTGTGCAGTACATGAGCGAACAAATTGCTAAGAGGGAAGAAAAATCACAAGTTGCCAAGCCCAAGAGCAGGTGGTCAAAATTTCTATCATGTCTGCTAATCTTGACTGGGAAGCGAAGAAGCAGAGGCTATGTCAAAGCTTGAACGGGATTGCTACAAAATGAATTTCTGGGCATGAAATTGTACTTTGTTCTACATGTGACCTGTCAAGCAGCATCAAAATAAGAAGAGTAGCAGGAAGCCCATCATTTGACCTTGTACGTTCCACTTTCTTTATAAGCCTATTCGAGAAAAACCCAATCCAGAGATTTTGAGGGAGCTTCTGGGATTGTGCTCAAGGTTGTTTGAAGCGAATCATATGTTGTGATCCAAGATTGTTTCCATGTTCAATGGTTTGAGATTTTTTTTTGTCTACACCCAAACTGGATCAGGAAGTGTGGCAATCAAATGTACTATTAGTGTGTGTCTTTTAATCAGTCATAATAAATGAACACTACTTGGAGGCCACTTGATTGTTGAGGTCTTATATCACTTGTAAATTTGAAAATTGTAAATGCTTTGCCTTTGCTTATAAATTTGAAAACTGTAAATGCTTTGCCTTTGTAGTTGAAATTTCTGGTTTTGCAAAAGTTGGTTCCAAATTTGC

Ace file of the UniGene sp_v3.0_unigene2247

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	plant intracellular ras group-related LRR 4 [Arabidopsis thaliana] emb\|CAB54875.1\| putative protein [Arabidopsis thaliana] emb\|CAB80263.1\| putative protein [Arabidopsis thaliana] gb\|AAL61931.1\| putative protein [Arabidopsis thaliana] gb\|AAM91130.1\| putati	-	-	0.0	51%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	56%
Sma3	Leucine-rich repeat-containing protein, putative	-	-	5.113e-09	-

Source	Gene names
Sma3	AT4g26050; AT4g35470; At2g17440; At3g11330; At4g26050; At4g29880; At4g35470; At4g35470/F15J1.40; F20B18.160; GSVIVT00015791001; GSVIVT00015986001; GSVIVT00019317001; GSVIVT00031308001; GSVIVT00035485001; LOC_Os10g42190; MICPUN_101709; MICPUN_107462; MICPU

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	protein tyrosine kinase activity	GO:0004713	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Glycoside hydrolase, family 10	IPR001000	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Leucine-rich repeat, typical subtype	IPR003591	-	-
Sma3	Tyrosine-protein kinase, active site	IPR008266	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G35470.1	PIRL4 plant intracellular ras group-related LRR 4 chr4:16846531-16848448 FORWARD LENGTH=549	53%
RefSeq	Arabidopsis thaliana	NP_195272.1	plant intracellular ras group-related LRR 4 [Arabidopsis thaliana]	53%
RefSeq	Populus trichocarpa	XP_002310108.1	predicted protein, partial [Populus trichocarpa]	55%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: D7SWD3

Fln msg:

Fln protein: MARSAHTVKEIVDEIMRLHRSLPPRPSHEEVEAALALVKDVQNREQSRLETVQQQPKPPDVPDELFSVLQEMQKNLIFLQSKEEKGEALALLDLEQCHCLFDDLLQKAAGSLSHIDQGNSRPSAVSSFHPNGVRELGNGEECFLKHLELKKNQEMGGIPQYSKDDSFIQKTKESHSEMRILGSEKDKVSLPISKEKYSSETGDDGQKLSLIKIASLIEATAKKGAESLDLRGRLVEQLEWLPDSIGKLSSLVQLNLSENHIVTLPSSIGNLSSLTRLDLHSNQLYSLPDSIGELSSLTDLDLHGNRLRTLPASTGDLSSLTNLNLSANQLSSLPESIGKLTNLKSLNVETNEIEELPYTIGQCTALIELRADFNHLKALPEAVGKLVSLEVLTLHYNRIKSLPTTMASLSSLKELDVSFNELESIPESLCFATSLVKLNVGRNFADLQSLPRSIGNLEMLEELDISSNQIKFLPDSFAMLRKLRVFKVEETPLEVPPRHIAEMGAQAVVQYMSEQIAKREEKSQVAKPKSRWSKFLSCLLILTGKRRSRGYVKA*

Protein Length: 556

Fln nts: TCTTTGGTTTTAGTAATTTTATGCTCATTGAGCTTCTTAATGTGCACTATATCTGGATGCCTGAGACTGATCCGTGAACTGTACAGGGGAAAAAGTAATTGAAGATTTTTGAAGTATTATTTTTGGGTGGTGCTTTACATAACA_-_ATGGCTAGATCAGCGCATACTGTGAAAGAGATAGTGGATGAGATTATGAGACTGCATAGATCTCTACCTCCTAGGCCTAGTCATGAGGAAGTTGAGGCTGCTCTTGCCCTGGTAAAGGATGTGCAAAATAGAGAACAGTCTCGCTTAGAAACGGTTCAACAACAACCCAAACCCCCTGATGTGCCAGACGAATTATTCTCTGTATTGCAGGAGATGCAGAAGAATCTCATTTTTTTACAGAGCAAGGAGGAAAAAGGCGAAGCATTAGCCCTTCTTGATTTGGAGCAGTGCCATTGTCTGTTCGATGATTTGCTACAAAAGGCCGCTGGGAGTCTTTCTCACATCGACCAAGGTAATTCAAGGCCTTCTGCGGTCTCATCTTTTCATCCAAATGGAGTTCGAGAGCTCGGGAATGGTGAAGAGTGTTTTCTGAAACACTTGGAACTTAAGAAAAATCAGGAGATGGGCGGTATTCCACAGTATAGTAAAGATGATAGTTTTATCCAAAAAACAAAAGAGTCACATTCGGAAATGAGAATTTTAGGATCAGAAAAAGACAAAGTTTCGCTGCCAATTTCCAAAGAAAAATATTCTTCTGAAACAGGGGACGATGGACAAAAACTCAGTCTAATAAAAATTGCCAGCCTTATTGAAGCAACTGCGAAGAAAGGTGCTGAGAGTTTGGATCTTCGAGGAAGATTAGTGGAACAGCTTGAGTGGCTCCCTGATTCAATTGGAAAGCTTAGCAGTCTTGTCCAACTCAATTTGTCTGAGAACCATATTGTGACACTTCCTAGTTCCATAGGAAACCTTTCCAGCTTAACACGTCTAGATTTGCACTCAAATCAATTGTACAGTCTTCCTGATTCCATTGGGGAGCTTTCAAGCCTGACTGATCTAGATTTACACGGCAACCGCTTGAGGACATTGCCTGCCTCAACTGGGGATCTTTCCAGTCTTACAAATCTTAACCTGAGCGCAAATCAGCTGTCCTCATTACCAGAGTCTATTGGGAAGCTGACCAACTTGAAAAGCCTAAATGTAGAGACAAATGAGATAGAGGAACTGCCATATACAATTGGCCAATGTACTGCCCTTATTGAATTGCGAGCTGATTTCAATCACCTCAAGGCATTGCCAGAAGCAGTTGGAAAGCTTGTGTCTTTAGAGGTCCTAACACTGCACTATAACAGAATAAAGAGCCTGCCAACTACTATGGCTTCTTTATCGAGTTTGAAAGAACTTGATGTGAGCTTCAATGAATTGGAGTCAATACCTGAAAGCTTGTGCTTTGCTACAAGTCTTGTCAAACTGAATGTTGGCAGAAACTTTGCTGACTTGCAGTCACTTCCCCGGTCCATAGGCAACCTTGAAATGCTTGAGGAGTTGGATATTAGTAGCAATCAGATAAAGTTCCTTCCAGATTCATTTGCTATGCTTAGAAAACTTCGAGTGTTTAAAGTAGAAGAGACCCCACTTGAAGTGCCTCCAAGGCATATAGCTGAAATGGGAGCTCAGGCGGTTGTGCAGTACATGAGCGAACAAATTGCTAAGAGGGAAGAAAAATCACAAGTTGCCAAGCCCAAGAGCAGGTGGTCAAAATTTCTATCATGTCTGCTAATCTTGACTGGGAAGCGAAGAAGCAGAGGCTATGTCAAAGCTTGA___ACGGGATTGCTACAAAATGAATTTCTGGGCATGAAATTGTACTTTGTTCTACATGTGACCTGTCAAGCAGCATCAAAATAAGAAGAGTAGCAGGAAGCCCATCATTTGACCTTGTACGTTCCACTTTCTTTATAAGCCTATTCGAGAAAAACCCAATCCAGAGATTTTGAGGGAGCTTCTGGGATTGTGCTCAAGGTTGTTTGAAGCGAATCATATGTTGTGATCCAAGATTGTTTCCATGTTCAATGGTTTGAGATTTTTTTTTGTCTACACCCAAACTGGATCAGGAAGTGTGGCAATCAAATGTACTATTAGTGTGTGTCTTTTAATCAGTCATAATAAATGAACACTACTTGGAGGCCACTTGATTGTTGAGGTCTTATATCACTTGTAAATTTGAAAATTGTAAATGCTTTGCCTTTGCTTATAAATTTGAAAACTGTAAATGCTTTGCCTTTGTAGTTGAAATTTCTGGTTTTGCAAAAGTTGGTTCCAAATTTGC

Fln Alignment:

Contig2247___MARSAHTVKEIVDEIMRLHRSLPPRPSHEEVEAALALVKDVQNREQSRLETXXXXXXXXXXXXELFSVLQEMQKNLIFLQSKEEKGEALALLDLEQCHCLFDDLLQKAAGSLS------HIDQGNSRPSAVSSFHPNGVRELGNGEECFLKHLELKKNQEMGGIPQYSKDDSFIQKTKESHSEMRILGSEKDKVSLPI---SKEKYSSETGDDGQKLSLIKIASLIEATAKKGAESLDLRGRLVEQLEWLPDSIGKLSSLVQLNLSENHIVTLPSSIGNLSSLTRLDLHSNQLYSLPDSIGELSSLTDLDLHGNRLRTLPASTGDXXXXXXXXXXXXXXXXXPESIGKLTNLKSLNVETNEIEELPYTIGQCTALIELRADFNHLKALPEAVGKLVSLEVLTLHYNRIKSLPTTMASLSSLKELDVSFNELESIPESLCFATSLVKLNVGRNFADLQSLPRSIGNLEMLEELDISSNQIKFLPDSFAMLRKLRVFKVEETPLEVPPRHIAEMGAQAVVQYMSEQIAKREEKSQVAKPKSRWSKFLSCLLILTGKRRSRG--YVKA
D7SWD3______________MESSAKSVDDVVGEIMRIHRSLPTRPGIDEVEAARTLIRNVEKEDQARLEAIGRQPRNPDVPEELFMVFQEMQKNLVSLQSKEEKREALKLLDLEGVHLMFDDLIERASRCLPSTSISHHSSSSSSSPSTLSKSSESAP---ASASATAFNSTVFKETPKVTDL--FTRDDSYVKKTKSTFYVDGI-GASPANLSTPQILDSSLKSPSTSGQDSEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDQIEWLPDSIGKLSSLMTLDLSENRIVALPATIGGLSSLTKLDLHSNRIAELPDCIGNLLSVVVLDLRGNQLTSLPATFCRLVRLEELDLSSNRLSSLPESIGSLVKLKKLSVETNDIEEIPHTIGQCSSLKELRADYNRLKALPEAVGRIQSLEILSVRYNNIKQLPTTMSSLSNLRELDVSFNELESIPESLCFATTLVKMNIGSNFADLQYLPRSIGNLEMLEELDISNNQIRVLPDSFKMLTRLRVLRLDQNPLEVPPRHVAEMGAQAVVQYMAELVAKREVKSLPVKQKKTWAQ--RCFFSRSNKRKRNGMDYVKA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain