SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene1220

Length: 5028 nt

UniGene Fasta

>sp_v3.0_unigene1220
CACGAGCTAAATCTGCTTCAGTTCTTGCTGCATTATTTAACTGCAGGACCGATTTACGTGAAAGCAATGTTGCAATTGAAAGCATTGGACCAGTCTTAAGGCTCCTCAACACACAATCAGAACAGATTTTGATTGAGGCAGCGCGTTGTCTTGCTGCTATTTTTCGTTCAATAAAACAGAGCCTGGAAGTTGCAAAGTTAGCTAGAGATGCACTTACACCATTAGTTAGCCTTGCAAAATCTTCAGTGATAGAAGTGGCAGAACAGGGCATAACAGCTCTAGCTAATCTTCTGTTAGATGCTGAAATTGCAGAAGAAGTGCAAGTTGAGGATATTATTTTACCTATAACTAGGGTCTTGCGGGAGGGAACTCATGATGGGAAGACACATGCTGCTGCAGCAATTGCACGTCTTCTTCAATCTCGACATGTTGATGATGCGCTGTGTGAAAGTATCCATCGTGCTGGAACTGTGCTTGCCTTAGTTGCACTTCTTGTGGCTGCCAATTTAGAAGATGATGCTACATCAGAAGCATTACATGCCCTTGCTTCATTAGCTAGGGTTAAAGGAGGGGTCACATATAGTCGACCACCATGGGCAGTTCTTGCTGAAGCTCCCTACAGTGTAGAACCTCTTGTTTCATGCTTAGCTGCTGGATCACCTCCCTTGCAGGAAAAAGCTATAGAAATCCTTTCAAGGCTTTGCCTAGATCAGTCTGATGGATTGGGAGACATGATCAGTGGCACATCTGGATGCATTGCTGCAATTGCAGGACGAATCATAAACTCTACTAACATAGAAGTCAAAGCAGGAGGAACTGCCCTTCTAATTTGTGCTGCAAAGGTGCACAAAGAGAAATCAATGGAAGCTCTCAATGAAGCTAACCTGAGCTTTGAGATTATACAGTCGCGACCTGAAATGCACGCATCTGGGACACTAGACACGGGTTTGGATAACAACAGTCAAGAAAGTGAACTGGAGAGAGATAGAAATACATTCAAGACAACTAAAGAACGTCCGGAAAGTGATTCAAATATTGAAAGTTTTACAGGTACTACTTCAGGAAGCTCGGTAGCTATATGGTTGCTTTCTGTGATGGCATCTAATGATAGCAAAAGTAAGTTTGCTATAATGGAGGCTGGTGCAATTGAAATGCTCACAGAGAGAATCTCACAATTTTCATCTCAAATTGTGCAGACTGACACTGAAGAAAATGGCAGTATATGGGTATGTGCTCTCTTACTGGCAATTCTGTTTCAAGATAGGGATATAATTCGTTCACCTGCAACAATGCGAGCCATCCCTGCACTTGCAACTTTACTGAAATCTGAGGAAACTGCAAACAAATACTTTGCTGCACAAGCTCTAGCTAGTCTGGTCTGTAATGGCAGCAGAGGTACTTTGCTTGCCGTAGCTAATTCAGGTGCTGCTGGTGGACTTATACCTTTACTTGGTTGTGCTGAAGCAGACATCTCAAAACTTGTAGAGCTGTCTGAGGAATTCTCGCTGGTTCACAATCCAGACCAAGTAGCTCTGGAGCGATTGTTCAGAGTTGATGATATCAAGGTTGGTGCAACTTCTCGCAAAGCAATACCTGCCTTGGTTGAACTGTTGAAACCCATTCCAGATCGTCCAGGTGCTCCTTACTTGGCACTGGGGCTTTTAACTCAACTTGCAGCAGATAATAATTCAAACAAGCTTGTAATGGCAGAAGCTGGGGCTATAGAAGCCTTAACAAAGTATCTCTCTCTTGGTCCTCAAGATGCTATAGAAGAAGCACTAGTAGAGTTATTAAGGATTCTTTTTAGTAGTCCTGAGATACGACGGCATGAATCGTGACCTTGGAGCTGTCAATCAAGCTTGTTGCAGTGTTGCGCTTGGGTACTAGGGGATCAAGGTACAGTGCAGCAAGAGCTTTGGAAGGTCTTTTTGCAGCAGATCACATTAAGGTTGGGGAAGCGGCCAGGCATGCTGTCCAGCCTCTTGTCGAAATTCTTAGCTCTGGGTCAGAAAATGAACAACGTGCTGCAATTGGTGCATTAATCAGGTTGTTGTTTGAAAATCCTTCAAGAGCGCTTGCTGTTGTTGATGTTGAAACAAATGCAGTGGACGTGTTATGCCGAATACTCTCGTCAAAATGCTCCATGGGGCTGAAAGAGGATGCTGCAGAGTTGTGTTGTGTTCTCTTTGGAAATTCAAGAATTAGATCTACACTAGCTGCAGCCAGATGTGTTGAACCTCTGGTTTCTCTTCTTATTACAGAGTTTAGTCCAGCCCACCTTGCTGTAGTCCGTGCTCTTGATAACCTATTGGATGATGAACAACTCGCAGAGCTTATTGCTGCACATGGTGCTGTTGTTCCACTTGTTGGACTTTTGTTTGGTGGGAATTATCCTCTTCATGAGACTGTTATTAATGCCCTGACAAAGTTGGGTAAAGATCGACCACTTTGCAAGCTTGATATGATTAAGGCTGGGGTGGTTGAAAACATACTAGAAATTCTGCCAGAAGCACCAGACTCTGTGTGTGCTGTGATGGCAGAATTACTTCGGATACTGACAAATAACAACAGCATTGCAAAAGGAACATCAGCTGCAAAAGTAGTTGATCCTCTTTTCTCAGTTTTAACACGACCTGACTTTAGTCCTGCAGGGCAGCATAGTGCAATGCAGGTGCTGGTCAATATCTTAGAGAGTCCTCAACGCCGTGCTACCTACAAGCTTACACCTTCTCAGGCGGTGGAGCCGCTGATTCCTCTATTAGATTCACCATCCCAGGCAGTGCAGCAACTTGCAGCAGAACTGCTTTCTCATTTACTTCTGGAGGAATACCTGCAAAGGGACATGATCACTCAACAGGCAATTGGTCCTCTGGTTCAGGTTCTTGGATCTGGTATGCCCAGTTTGCAACAAAAGGCAATCAAAGCTCTTGTAAGTGTTTCATTAAGTTGGCCAAATGCAATTGCAGAAGTAGGCGGAGTCCTTGAGCTTTCAAAGGTGATTCTACAGGCTGACCCTCCACTTCCCCATGTACTCTGGGAATCTGCAGCTTCTGTACTATCAAGTATTTTACAATTCAGTTCCCAGTATTATTTGGAGGTGCCTGTTGCAGTCCTAGTAAAAATGCTCCGCTCTGGTTCAGAAGCTACTGTTGTAGGTGCATTAAATGCCCTTCTTGTTCTGGAGACTGATGATGCATCTAGTGCTGAAGCCATGGCAGAAAGTGGTGCCATTGAGGCACTCCTGGAACTTCTTAGGTGTCATCAGTGTGAGGAGGCTGCGGCAAGACTGCTGGAAGCCTTGCTGAATAATGTCAAGATCAGAGACTTGAAAGTTGCAAAGTCGGCAATTTCTCCATTATCTCAGTATTTGCTTGATCCTCAGACTCAGACTCAGCAAGCAAGACTGCTAGCTGCTCTTGCCCTGGGGGATCTGTTTCAAAATGAGACTCTGGCAAGGACAACAGATGCAATCTCTGCTTGCCGTGCACTTGTGAATCTGCTTGAGGACCAACCAACAGAAGAGATGAAGGTAGTTTCCATTTGTGCTCTGCAAAATCTAGTTATGTACAGCCGCTCAAATAAGCGGGCGGTTGCAGAAGCTGGCGGAATTCAGGTTGTCCTTGACCTTATCAGCTCTAGTGATCCTGATACAGCAATCCAGGCAGCTATTTTTATAAAGCTTCTGTTCTCCAGTACTACCGTTCAGGAATATGCCTCTAGTGACACTGTCCGAGCTTTGGTTGTTGCCATTGAAAATGACTTATTGGCCACGGGTACTGTAAGTGAAGATTACTTGAAAGCATTAAATGCTCTCTTTGGCAATTTTCCAAGGCTCAGAGCAACAGAACCAGCTACAGCTTGCATTGGTCATTTAGTTGCCGCCTTGAAGTCTGGGCCAGAAGCAACTCAGGAAGCAGCCTTGGATTCACTTTTTCTTCTTAGGCAAGCTTGGTCAACATGTCCAGCTGAAGTTGGCAAAGCCCAAGCTGTTTCTGCAGCAGAGGCTATTCCAATTCTTCAGTATTTGATTCAATCAGGACCACCTCGTTTTCAAGAAAAGGCAGAGCTCCTCCTGCAGTGCTTACCAGGAACTCTATTGGTAACTATCAAGCGGGGCATCAACCTGAAGCAGTCAGTGGGTAATCCAAGTGTGTACTGCAAACTTACACTTGGGAATGGTCCACCAAGGCAAACTAAGGTTGTGTCAACTGGTCCCTCTCCAGAATGGGATGAAGCTTTTGCTTGGGCTTTTGACAGTCCACCAAAAGGTCAAAAGCTTCACATATCTTGCAAGAACAAGAGTAGCTTTGGGAAGAGCTCATTTGGTAAGGTCACCATTCAGATTGACCGCGTTGTCATGTTGGGAGCAATTGCTGGCGAGTACACTCTTCTACCAGACAAGAGTAAGGCCGGCCAATCACGTAATCTAGAAATTTTATTCCAGTGGTCGAACAAGTGATTGCGGGATAAGTGTGCGCATTGTTGTCTATATTTGTAAATCTAATTGTTAAGGTCCGCACTGGAAGAAGGGCTTTTTGTACTCTAGTGTTTGCCTTTAAAAAATGTCCCTTGCAACATTGTCGTGCATCCAATTGTTGCAATGTGAATGGATGTGTCTTTTTCTCAGTAATACAGCGAGTGTTCTTTTGAGTCAGAAGATGCTATTGTTTCTCAATATTCTTTCATTTTTTTGAGTCGGCAAAGCATTCATTGTATATGGATGACCTTTCAAGTTTCATCTATAAGGAGGTGCATGAATAAGTCCAGTTGTTGCATCTTCAGGTAACTTATCCTTGTTGAGCCTGCTAGGGGCATCCTATCCTCTCTATAGCTTCTTCTTACCTGAGCAGTGAGTTTCTAAGAGTGCAATTTGATTCCTGTCTAAATATTATTGGAGGTGTTTTTCCAAGGCGATTGAAATGCGTAAATGCAGCTGCCCTTCGTGTATAAATGTGGCTATTCTATCTGTGTTGTGTATTTTATGTTATTTTAAGTGTTATTTAATATGATGAACTGGAACGTTTTAGC

Ace file of the UniGene sp_v3.0_unigene1220

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SSL4_RICCO	-	-	0.0	72%
FL-Next	sp=U-box domain-containing protein 12; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	32%

Source	Gene names
Sma3	At1g44120; At1g77460; At1g77460/T5M16_5; At2g22125; At2g22130; GSVIVT00000933001; GSVIVT00015414001; GSVIVT00019435001; GSVIVT00019436001; GSVIVT00026667001; LOC_Os11g08090; Os06g0223800; Os11g0183800; OsI_22208; OsI_35372; OsJ_20645; OsJ_33209; P0638H11.

Source	GOs	Term	Type	e value	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	0.0	-
Sma3	binding	GO:0005488	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	C2 calcium-dependent membrane targeting	IPR000008	-	-
Sma3	NUDIX hydrolase domain	IPR000086	-	-
Sma3	Armadillo	IPR000225	-	-
Sma3	HEAT	IPR000357	-	-
Sma3	Bacterial extracellular solute-binding protein, family 5	IPR000914	-	-
Sma3	Ribonuclease A	IPR001427	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	C2 membrane targeting protein	IPR018029	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G22125.1	CSI1 binding chr2:9406793-9414223 FORWARD LENGTH=2150	77%
RefSeq	Arabidopsis thaliana	NP_179803.4	cellulose synthase-interactive protein 1 [Arabidopsis thaliana]	77%
RefSeq	Populus trichocarpa	XP_002310584.1	predicted protein [Populus trichocarpa]	78%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: sp_plants

Fln subject: Q9ZV31

Fln msg: query STOP codon too far from subject stop. Distance to subject end: 218 aas, putative chimeric sequence, No stop codon before M and M found is too far from subject M, your sequence is shorter than subject: 369 - 654

Fln protein: MISGTSGCIAAIAGRIINSTNIEVKAGGTALLICAAKVHKEKSMEALNEANLSFEIIQSRPEMHASGTLDTGLDNNSQESELERDRNTFKTTKERPESDSNIESFTGTTSGSSVAIWLLSVMASNDSKSKFAIMEAGAIEMLTERISQFSSQIVQTDTEENGSIWVCALLLAILFQDRDIIRSPATMRAIPALATLLKSEETANKYFAAQALASLVCNGSRGTLLAVANSGAAGGLIPLLGCAEADISKLVELSEEFSLVHNPDQVALERLFRVDDIKVGATSRKAIPALVELLKPIPDRPGAPYLALGLLTQLAADNNSNKLVMAEAGAIEALTKYLSLGPQDAIEEALVELLRILFSSPEIRRHES*

Protein Length: 370

Fln nts: CACGAGCTAAATCTGCTTCAGTTCTTGCTGCATTATTTAACTGCAGGACCGATTTACGTGAAAGCAATGTTGCAATTGAAAGCATTGGACCAGTCTTAAGGCTCCTCAACACACAATCAGAACAGATTTTGATTGAGGCAGCGCGTTGTCTTGCTGCTATTTTTCGTTCAATAAAACAGAGCCTGGAAGTTGCAAAGTTAGCTAGAGATGCACTTACACCATTAGTTAGCCTTGCAAAATCTTCAGTGATAGAAGTGGCAGAACAGGGCATAACAGCTCTAGCTAATCTTCTGTTAGATGCTGAAATTGCAGAAGAAGTGCAAGTTGAGGATATTATTTTACCTATAACTAGGGTCTTGCGGGAGGGAACTCATGATGGGAAGACACATGCTGCTGCAGCAATTGCACGTCTTCTTCAATCTCGACATGTTGATGATGCGCTGTGTGAAAGTATCCATCGTGCTGGAACTGTGCTTGCCTTAGTTGCACTTCTTGTGGCTGCCAATTTAGAAGATGATGCTACATCAGAAGCATTACATGCCCTTGCTTCATTAGCTAGGGTTAAAGGAGGGGTCACATATAGTCGACCACCATGGGCAGTTCTTGCTGAAGCTCCCTACAGTGTAGAACCTCTTGTTTCATGCTTAGCTGCTGGATCACCTCCCTTGCAGGAAAAAGCTATAGAAATCCTTTCAAGGCTTTGCCTAGATCAGTCTGATGGATTGGGAGACATGATCAGTGGCACATCTGGATGCATTGCTGCAATTGCAGGACGAATCATAAACTCTACTAACATAGAAGTCAAAGCAGGAGGAACTGCCCTTCTAATTTGTGCTGCAAAGGTGCACAAAGAGAAATCAATGGAAGCTCTCAATGAAGCTAACCTGAGCTTTGAGATTATACAGTCGCGACCTGAAATGCACGCATCTGGGACACTAGACACGGGTTTGGATAACAACAGTCAAGAAAGTGAACTGGAGAGAGATAGAAATACATTCAAGACAACTAAAGAACGTCCGGAAAGTGATTCAAATATTGAAAGTTTTACAGGTACTACTTCAGGAAGCTCGGTAGCTATATGGTTGCTTTCTGTGATGGCATCTAATGATAGCAAAAGTAAGTTTGCTATAATGGAGGCTGGTGCAATTGAAATGCTCACAGAGAGAATCTCACAATTTTCATCTCAAATTGTGCAGACTGACACTGAAGAAAATGGCAGTATATGGGTATGTGCTCTCTTACTGGCAATTCTGTTTCAAGATAGGGATATAATTCGTTCACCTGCAACAATGCGAGCCATCCCTGCACTTGCAACTTTACTGAAATCTGAGGAAACTGCAAACAAATACTTTGCTGCACAAGCTCTAGCTAGTCTGGTCTGTAATGGCAGCAGAGGTACTTTGCTTGCCGTAGCTAATTCAGGTGCTGCTGGTGGACTTATACCTTTACTTGGTTGTGCTGAAGCAGACATCTCAAAACTTGTAGAGCTGTCTGAGGAATTCTCGCTGGTTCACAATCCAGACCAAGTAGCTCTGGAGCGATTGTTCAGAGTTGATGATATCAAGGTTGGTGCAACTTCTCGCAAAGCAATACCTGCCTTGGTTGAACTGTTGAAACCCATTCCAGATCGTCCAGGTGCTCCTTACTTGGCACTGGGGCTTTTAACTCAACTTGCAGCAGATAATAATTCAAACAAGCTTGTAATGGCAGAAGCTGGGGCTATAGAAGCCTTAACAAAGTATCTCTCTCTTGGTCCTCAAGATGCTATAGAAGAAGCACTAGTAGAGTTATTAAGGATTCTTTTTAGTAGTCCTGAGATACGACGGCATGAATCGTGA___CCTTGGAGCTGTCAATCAAGCTTGTTGCAGTGTTGCGCTTGGGTACTAGGGGATCAAGGTACAGTGCAGCAAGAGCTTTGGAAGGTCTTTTTGCAGCAGATCACATTAAGGTTGGGGAAGCGGCCAGGCATGCTGTCCAGCCTCTTGTCGAAATTCTTAGCTCTGGGTCAGAAAATGAACAACGTGCTGCAATTGGTGCATTAATCAGGTTGTTGTTTGAAAATCCTTCAAGAGCGCTTGCTGTTGTTGATGTTGAAACAAATGCAGTGGACGTGTTATGCCGAATACTCTCGTCAAAATGCTCCATGGGGCTGAAAGAGGATGCTGCAGAGTTGTGTTGTGTTCTCTTTGGAAATTCAAGAATTAGATCTACACTAGCTGCAGCCAGATGTGTTGAACCTCTGGTTTCTCTTCTTATTACAGAGTTTAGTCCAGCCCACCTTGCTGTAGTCCGTGCTCTTGATAACCTATTGGATGATGAACAACTCGCAGAGCTTATTGCTGCACATGGTGCTGTTGTTCCACTTGTTGGACTTTTGTTTGGTGGGAATTATCCTCTTCATGAGACTGTTATTAATGCCCTGACAAAGTTGGGTAAAGATCGACCACTTTGCAAGCTTGATATGATTAAGGCTGGGGTGGTTGAAAACATACTAGAAATTCTGCCAGAAGCACCAGACTCTGTGTGTGCTGTGATGGCAGAATTACTTCGGATACTGACAAATAACAACAGCATTGCAAAAGGAACATCAGCTGCAAAAGTAGTTGATCCTCTTTTCTCAGTTTTAACACGACCTGACTTTAGTCCTGCAGGGCAGCATAGTGCAATGCAGGTGCTGGTCAATATCTTAGAGAGTCCTCAACGCCGTGCTACCTACAAGCTTACACCTTCTCAGGCGGTGGAGCCGCTGATTCCTCTATTAGATTCACCATCCCAGGCAGTGCAGCAACTTGCAGCAGAACTGCTTTCTCATTTACTTCTGGAGGAATACCTGCAAAGGGACATGATCACTCAACAGGCAATTGGTCCTCTGGTTCAGGTTCTTGGATCTGGTATGCCCAGTTTGCAACAAAAGGCAATCAAAGCTCTTGTAAGTGTTTCATTAAGTTGGCCAAATGCAATTGCAGAAGTAGGCGGAGTCCTTGAGCTTTCAAAGGTGATTCTACAGGCTGACCCTCCACTTCCCCATGTACTCTGGGAATCTGCAGCTTCTGTACTATCAAGTATTTTACAATTCAGTTCCCAGTATTATTTGGAGGTGCCTGTTGCAGTCCTAGTAAAAATGCTCCGCTCTGGTTCAGAAGCTACTGTTGTAGGTGCATTAAATGCCCTTCTTGTTCTGGAGACTGATGATGCATCTAGTGCTGAAGCCATGGCAGAAAGTGGTGCCATTGAGGCACTCCTGGAACTTCTTAGGTGTCATCAGTGTGAGGAGGCTGCGGCAAGACTGCTGGAAGCCTTGCTGAATAATGTCAAGATCAGAGACTTGAAAGTTGCAAAGTCGGCAATTTCTCCATTATCTCAGTATTTGCTTGATCCTCAGACTCAGACTCAGCAAGCAAGACTGCTAGCTGCTCTTGCCCTGGGGGATCTGTTTCAAAATGAGACTCTGGCAAGGACAACAGATGCAATCTCTGCTTGCCGTGCACTTGTGAATCTGCTTGAGGACCAACCAACAGAAGAGATGAAGGTAGTTTCCATTTGTGCTCTGCAAAATCTAGTTATGTACAGCCGCTCAAATAAGCGGGCGGTTGCAGAAGCTGGCGGAATTCAGGTTGTCCTTGACCTTATCAGCTCTAGTGATCCTGATACAGCAATCCAGGCAGCTATTTTTATAAAGCTTCTGTTCTCCAGTACTACCGTTCAGGAATATGCCTCTAGTGACACTGTCCGAGCTTTGGTTGTTGCCATTGAAAATGACTTATTGGCCACGGGTACTGTAAGTGAAGATTACTTGAAAGCATTAAATGCTCTCTTTGGCAATTTTCCAAGGCTCAGAGCAACAGAACCAGCTACAGCTTGCATTGGTCATTTAGTTGCCGCCTTGAAGTCTGGGCCAGAAGCAACTCAGGAAGCAGCCTTGGATTCACTTTTTCTTCTTAGGCAAGCTTGGTCAACATGTCCAGCTGAAGTTGGCAAAGCCCAAGCTGTTTCTGCAGCAGAGGCTATTCCAATTCTTCAGTATTTGATTCAATCAGGACCACCTCGTTTTCAAGAAAAGGCAGAGCTCCTCCTGCAGTGCTTACCAGGAACTCTATTGGTAACTATCAAGCGGGGCATCAACCTGAAGCAGTCAGTGGGTAATCCAAGTGTGTACTGCAAACTTACACTTGGGAATGGTCCACCAAGGCAAACTAAGGTTGTGTCAACTGGTCCCTCTCCAGAATGGGATGAAGCTTTTGCTTGGGCTTTTGACAGTCCACCAAAAGGTCAAAAGCTTCACATATCTTGCAAGAACAAGAGTAGCTTTGGGAAGAGCTCATTTGGTAAGGTCACCATTCAGATTGACCGCGTTGTCATGTTGGGAGCAATTGCTGGCGAGTACACTCTTCTACCAGACAAGAGTAAGGCCGGCCAATCACGTAATCTAGAAATTTTATTCCAGTGGTCGAACAAGTGATTGCGGGATAAGTGTGCGCATTGTTGTCTATATTTGTAAATCTAATTGTTAAGGTCCGCACTGGAAGAAGGGCTTTTTGTACTCTAGTGTTTGCCTTTAAAAAATGTCCCTTGCAACATTGTCGTGCATCCAATTGTTGCAATGTGAATGGATGTGTCTTTTTCTCAGTAATACAGCGAGTGTTCTTTTGAGTCAGAAGATGCTATTGTTTCTCAATATTCTTTCATTTTTTTGAGTCGGCAAAGCATTCATTGTATATGGATGACCTTTCAAGTTTCATCTATAAGGAGGTGCATGAATAAGTCCAGTTGTTGCATCTTCAGGTAACTTATCCTTGTTGAGCCTGCTAGGGGCATCCTATCCTCTCTATAGCTTCTTCTTACCTGAGCAGTGAGTTTCTAAGAGTGCAATTTGATTCCTGTCTAAATATTATTGGAGGTGTTTTTCCAAGGCGATTGAAATGCGTAAATGCAGCTGCCCTTCGTGTATAAATGTGGCTATTCTATCTGTGTTGTGTATTTTATGTTATTTTAAGTGTTATTTAATATGATGAACTGGAACGTTTTAGC

Fln Alignment:

Contig1220___LLKPIPDRPGAPYLALGLLTQLAADNNSNKLVMAEAGAIEALTKYLSLGPQDAIEEALV
Q9ZV31______________LLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAV

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
1569	14			85	0.993533
1570		14		85	0.993533
1571	14		85		0.993533
1572			85	14	0.993533
2734	16	83			0.994512
2745	20		80		0.995493
2806		33	66		1.0
2809		75		25	0.996473
3016	20		80		0.995493
3019			80	20	0.995493
3218	16	83			0.994512
3222			83	16	0.994512
3264	25		75		0.996473
3265		25		75	0.996473
3266	25		75		0.996473
3268		75		25	0.996473
3568	20		80		0.995493
3570			20	80	0.995493
3571	80		20		0.995493
3572			20	80	0.995493
3620	75	25			0.996473
3838	88	11			0.923564
4235			85	14	0.993533
4554		10	90		0.999898
4658	72			27	1.0
4660		10		90	0.90298
4753	88		11		0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain