SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene1006

Length: 1785 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene1006

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	lanatoside 15'-O-acetylesterase [Digitalis lanata]	-	-	0.0	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Sma3	Esterase, putative	-	-	4.876e-11	-

Source	ECs	Term	Type	e value	Identity
Sma3	Hydrolases, Acting on ester bonds, Carboxylic ester hydrolases.	EC:3.1.1.-	-	2.007e-07	-

Source	KEGGs	Term	e value	Identity
Sma3	Ascorbate and aldarate metabolism	00053	2.007e-07	%
Sma3	Bisphenol degradation	00363	2.007e-07	%
Sma3	Glycerophospholipid metabolism	00564	2.007e-07	%
Sma3	Toluene degradation	00623	2.007e-07	%
Sma3	Aminobenzoate degradation	00627	2.007e-07	%
Sma3	Retinol metabolism	00830	2.007e-07	%
Sma3	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	2.007e-07	%

Source	Gene names
Sma3	At4g01130; At5g14450; ENOD8; F18O22.240; F2N1.17; GSVIVT00026974001; GSVIVT00030757001; GSVIVT00030758001; IG002N01.17; MtrDRAFT_AC150244g3v2; MtrDRAFT_AC172101g2v1; OJ1113_E01.104; Os06g0160200; Os07g0586100; OsI_21767; OsI_26660; OsJ_20209; OsJ_24919; P

Source	GOs	Term	Type	Identity
Sma3	plant-type cell wall	GO:0009505	Cellular Component	-
Sma3	transferase activity	GO:0016740	Molecular Function	-
Sma3	hydrolase activity, acting on ester bonds	GO:0016788	Molecular Function	-
Sma3	IgE binding	GO:0019863	Molecular Function	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	-
Sma3	defense response	GO:0006952	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Lipase, GDSL	IPR001087	-	-
Sma3	Lipase, GDSL, active site	IPR008265	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002320844.1	predicted protein [Populus trichocarpa]	0.0	45%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LMG5

Fln msg:

Fln protein: MGSHLLLQALVLAALLPVICYGKCDFPAIFNFGDSNSDTGGWHFAFPYQMLPDNAPYGRTYFGSPSYRYSDGRLAIDFFAQALGLPFLSPFLQSVGSRFEHGANFAASGAAARPTSTDFNAPISLSVQLNEFQVFKQQVLDTISSHGNLNYLPSADAFKNGIYTIEIGGNDFDSAYRSLKLSPVQVKQTILPKLAKSVAGAVQELSSTGAKTVLVKNIGPQGCGPFWLSYFSHAPNDFDKYGCSISYNDAVKFYNTQLQEQLALLRKQLPGTDIVYVNQYDIIYDFFANPSTYGFKATTQACCGVGGKYNFTWSAQCGLTGPVNGKTVSVGSCSDPASYIIWDGIHLTDQANRLLTKQILTGKYFDPPSFSISNRCQIQPI*

Protein Length: 383

Fln nts: CTGCTTAAGCAGTGATAGCAACGAAGAGTACTCGGACGGATATCCATTTCAGAGTTCTCGAGAATCCATTGCCGGTTAATCAGAGTTTTCACGTTTCAGTCATAGG_-_ATGGGTTCTCATTTGCTTTTACAGGCCCTCGTGCTGGCGGCCCTGCTGCCTGTAATCTGTTATGGCAAATGTGACTTCCCTGCCATATTTAATTTTGGGGACTCCAACTCCGACACGGGTGGATGGCACTTTGCATTCCCTTATCAAATGCTTCCGGATAATGCTCCCTATGGCAGAACATACTTTGGCTCTCCTTCATATCGGTACAGCGACGGAAGACTTGCAATAGATTTCTTCGCACAGGCGTTGGGATTGCCATTTTTAAGCCCATTTTTGCAGTCAGTGGGGTCAAGGTTCGAACATGGAGCAAACTTTGCCGCTTCCGGTGCTGCTGCTCGCCCGACCTCGACCGATTTTAATGCTCCCATATCTCTTAGTGTTCAGCTTAATGAGTTCCAGGTCTTCAAGCAACAGGTTCTCGACACGATCAGCTCGCACGGGAATTTGAACTATCTTCCAAGCGCAGATGCCTTTAAAAACGGCATTTATACCATAGAAATTGGGGGCAACGACTTCGACAGTGCATACAGAAGCCTTAAACTTTCCCCTGTCCAGGTCAAGCAGACCATTCTTCCCAAGCTTGCCAAGTCTGTTGCAGGAGCTGTCCAGGAGCTGTCCAGTACAGGGGCGAAGACAGTTCTTGTGAAGAACATTGGGCCTCAAGGCTGCGGACCCTTCTGGCTCAGTTACTTCAGTCACGCACCCAACGATTTTGATAAATACGGATGCTCGATATCATACAATGACGCTGTGAAATTCTACAACACACAACTTCAAGAACAGCTTGCTCTTCTGCGCAAGCAGCTCCCGGGAACCGACATTGTATATGTCAATCAATATGACATAATCTACGATTTCTTTGCCAACCCTTCTACCTATGGATTCAAGGCCACCACTCAAGCTTGCTGTGGAGTTGGAGGAAAATACAACTTCACCTGGTCTGCACAATGTGGACTCACGGGCCCTGTTAATGGCAAGACTGTGTCGGTGGGTTCCTGTTCAGATCCCGCCTCTTATATAATCTGGGATGGAATCCACTTAACAGACCAGGCCAATAGGCTCTTGACTAAGCAAATTCTGACTGGCAAATACTTCGACCCACCTTCATTTTCTATCAGTAACCGTTGCCAAATCCAACCCATTTGA___TCACATTCGGCGTCCTGATTATTCATTGTTTTTGTGAATGTATAATAAACTTGGGGCTGGCAGAGCTCCAGCTGCAGTGTCAGCTTGTAATAGCATTGCTATGATGATTTTAAAAAACGGGCTTAATCAATTCATGTCAGCGTCTGAGAAGGCTGTCAGAAATTTCTTCTGCAACCTTTTAACTGTAGTGAAGGACCAATCTTGTCTGGGGAAAAGTGTTATAAGATGAAATTGGCTAGACAAGAAAAATGTGTAATAAGATGAAGTTGGTTTATGTAATGATAGATGATTCTTGTTAATAAGATGAAACTTGTTTCTTTGGATTTTATTCAAGAGGAGCACAATGTCAGCCTCTGAAAAGGCTTTCAGAAAATTCTTCTGCAACCTTTTAACCGTAGTGATGGACCAGATGGACCAATTTTGTGTGGGAAAAATGTAATAAGATGAACTTGGCTAGACAAGAATGTGTAATAAGATGAAGTTGGTTTATGTAATGATAGATGATTTTTGTATCAGAAAAATGCAATAAGATG

Fln Alignment:

Contig1006___MGSHXXXXXXXXXXXXPVICYGKCDFPAIFNFGDSNSDTGGWHFAFPYQMLPDNAPYGRTYFGSPSYRYSDGRLAIDFFAQALGLPFLSPFLQSVGSRFEHGXXXXXXXXXXRPTSTDFNAPISLSVQLNEFQVFKQQVLDTISSHGNLNYLPSADAFKNGIYTIEIGGNDFDSAYRSLKLSPVQVKQTILPKLAKSVAGAVQELSSTGAKTVLVKNIGPQGCGPFWLSYFSHAPNDFDKYGCSISYNDAVKFYNTQLQEQLALLRKQLPGTDIVYVNQYDIIYDFFANPSTYGFKATTQACCGVGGKYNFTWSAQCGLTGPVNGKTVSVGSCSDPASYIIWDGIHLTDQANRLLTKQILTGKYFDPPSFSISNRCQIQPI
B8LMG5______________MGSRFFLQALVLTALLPVIAYGKCDFPAIFNFGDSNSDTGGWHFAFPYQMLPDNAPYGRTFFGQPSYRYSDGRLSVDFLAQALGLPFISPFLQSVGSRFEQGANFAASGASVRPTSTDFNAPISLTVQLNQFKVFKQQVLDTISSHGSLNYLPSADSFKTGIYTIEIGGNDFDNAYRSLKLSPLQVKQTILPKLAKSVGGAVQELYNEGARTILVKDVGPQGCGPFWLTYFSHAPTDFDQHGCSISYNDAVQFYNTQLREQLSLVRKQLPGADIVYVSQYDIIYDFFANPSKYGFKATTQSCCGVGGKYNFTWAAQCGLTGPVNGKSVTVGSCSDPASYIIWDGIHLTDQANRVLTQQILGGKYFEPSTFSITSRCQIQPI

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
731			93	6	0.999364
1065		88	11		0.999937
1249		4		95	0.995881
1288			92	7	0.999602
1469	84			15	0.999991
1676		16		83	0.994512
1702	83			16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain