SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene796

Length: 2016 nt

UniGene Fasta

>sp_v3.0_unigene796
GAACTCATTCTCTATAAAGCTTTAATTTGCAGAGACGGGGAGGGGAACAATAAAGTTTTCAGGCTTTTGTTTGATTTAAGAAGTTGTCTTAAAAAGCTGTCTGTTCAATCAGTTAATCGCTAGAAAGTCATGGCAGATACGTCTTTCAGCGGGTTCTGGGATCGATTCCCGCATAGAAGGCCACAGCGCAGTCCTTACAGTTCTCATCCCTACGCTGCATCCAATGTGACTCCAACAAAACCCGAATATGATTACTGGGGCGCTCCGAAGGTTAAGCCCAGGACATTCACAGTTCCTGTCTATGGTCCTTCTGATCATCCGTCGCCAAGTCCGAGTTCGGTGACCAAAGGGAATGGTAATTCAGAACCTAATCCCAAGAAGGTTGTTTCGATACCCATCGATTCCGAGACTCGCGTTTCGTCTTCAGGGATCAAGAAGGTCGCGGTTCCTCTATTGGACGAGGCTTCTGCAGCCAAGAAAATTCAGTCGTCTTTCAGAGGTTTTTCCGCCAGGAAGGGTGCACCTTTAAAGAAATTGAGGGTTATACGAGATGTGAAGGCAAAGGCCGAAGATATACGACGGCGTCTTGCTGATAGTCAAGTGGTGGAGTCGATCCTTCAGAACGAGAAGGAACGCCTGAAGATCAACGAGGGCATAATGTCACTGCTGCTAAAACTTGACGCAATTCAGGGTGTGAATTCATTTGTGAGGGAATCAAGGAAAGCGGTAATTCGTGAGCTTGTTAATCTGCAAGAAATGGTAGATGTCATATTAGGTGGCAAATCGATAAGAGGGGGAGGTTCGCCGGGTGTAGAAGATGCGGAGGATTTGCATGGGCGGGGTCCCAGTGAAGAAGGTATAAAGGATGAAGGGTTGCCAGATGGTGTCAACTTAGCCGTGGCCTCTGCGCATGATTCAAATGTGCAAGAAGAGGGATCCGTTATTTCTGATAGAATTGAAATTGAGGCCCCAAATCATACTGAGGGTATTTCCATGGTCACAGGCAGTAGTAGTGGGGAAGTGTCATCAGAGGTAATTGCATCAAAGGAAAACACGGTTCAGGAGCAGGAAGTGGGGGATGATTCAGAGGTGCAAGAAGAGGGATCCGTTCATCCTGTTAAAAGTGAAACACAGACTATGCAAATTGAGCCCCCTAACCATACTGAGGATATTTTCATTGTCATGGGAAGTGGCGAAGAGGCATCAGAAGTAGTTGCATCGAATGAAAACAAGGTTCAGGATCAGGAGTTGGAATCATATGATGAGGATGCAAAGAGAGATTCAATTGACGAAGACAAAGCTACGTATGGCGCTTTAAGTTCTGAAGGGCAGAGTCGGGAGGAGTTGAGAGCTTCGGAATCTCAAAGCGTCCCCTTCACAAATGAAGAGATTATCGGATTTGAAGAAAACATATGTGCAAACAGTGCAGATTGTGAAGTACAGACATACAGGGGGTTGAATGATTTGGATCTGTCAAAATCACAAGCGGAGACAAATGAAGTCGCTGAACAGCATGGAGAGGGTGAAGGCATGGACTGTGAAGAGACTCAGAAGGTAATAGGTACAGGAGCGGGGGAAAATACTAATGTTGAAGAAGGCATTGTGAAGGTGCGAGATGAGAACGAGAGATTGAAGAAGATGGTGGCTGATCTGTTCAACAAAACTGAAATGCAGAATCAGTTGATTAATACCCTGAGCTTGAGAATTGCACAGCTAGAGGAACAAATATCCAATAAAAGGAAGAAATCTGGATACAAAAACAAAACAAAAAACCCCAGCAACGGTATCACTCGCAGACGGAATAATGGGGAGGAGGATAAAAGTCAGTAAATACCCGCGACGTATTTCCAGTGAAAATGTAGAGCATATAACATGCATATAATTGTTATGCATATAATATCCCCGCTGTATGTTTGAAATAAAAAAGTTTTGTATATTCCATTGGATGTAATGAAAGGGTTTTAATGCAATAAGTTTCTAAATATACAAATTCTGTTTCAATTTTTGCAAGTTTTG

Ace file of the UniGene sp_v3.0_unigene796

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	BCL-2-associated athanogene 6 [Arabidopsis thaliana] gb\|AAC62882.1\| hypothetical protein [Arabidopsis thaliana] gb\|AEC10664.1\| BCL-2-associated athanogene 6 [Arabidopsis thaliana]	-	-	5.0e-17	23%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	26%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: B9GZD2

Fln msg: your sequence is longer than subject: 567 - 530

Fln protein: MADTSFSGFWDRFPHRRPQRSPYSSHPYAASNVTPTKPEYDYWGAPKVKPRTFTVPVYGPSDHPSPSPSSVTKGNGNSEPNPKKVVSIPIDSETRVSSSGIKKVAVPLLDEASAAKKIQSSFRGFSARKGAPLKKLRVIRDVKAKAEDIRRRLADSQVVESILQNEKERLKINEGIMSLLLKLDAIQGVNSFVRESRKAVIRELVNLQEMVDVILGGKSIRGGGSPGVEDAEDLHGRGPSEEGIKDEGLPDGVNLAVASAHDSNVQEEGSVISDRIEIEAPNHTEGISMVTGSSSGEVSSEVIASKENTVQEQEVGDDSEVQEEGSVHPVKSETQTMQIEPPNHTEDIFIVMGSGEEASEVVASNENKVQDQELESYDEDAKRDSIDEDKATYGALSSEGQSREELRASESQSVPFTNEEIIGFEENICANSADCEVQTYRGLNDLDLSKSQAETNEVAEQHGEGEGMDCEETQKVIGTGAGENTNVEEGIVKVRDENERLKKMVADLFNKTEMQNQLINTLSLRIAQLEEQISNKRKKSGYKNKTKNPSNGITRRRNNGEEDKSQ*

Protein Length: 568

Fln nts: GAACTCATTCTCTATAAAGCTTTAATTTGCAGAGACGGGGAGGGGAACAATAAAGTTTTCAGGCTTTTGTTTGATTTAAGAAGTTGTCTTAAAAAGCTGTCTGTTCAATCAGTTAATCGCTAGAAAGTC_-_ATGGCAGATACGTCTTTCAGCGGGTTCTGGGATCGATTCCCGCATAGAAGGCCACAGCGCAGTCCTTACAGTTCTCATCCCTACGCTGCATCCAATGTGACTCCAACAAAACCCGAATATGATTACTGGGGCGCTCCGAAGGTTAAGCCCAGGACATTCACAGTTCCTGTCTATGGTCCTTCTGATCATCCGTCGCCAAGTCCGAGTTCGGTGACCAAAGGGAATGGTAATTCAGAACCTAATCCCAAGAAGGTTGTTTCGATACCCATCGATTCCGAGACTCGCGTTTCGTCTTCAGGGATCAAGAAGGTCGCGGTTCCTCTATTGGACGAGGCTTCTGCAGCCAAGAAAATTCAGTCGTCTTTCAGAGGTTTTTCCGCCAGGAAGGGTGCACCTTTAAAGAAATTGAGGGTTATACGAGATGTGAAGGCAAAGGCCGAAGATATACGACGGCGTCTTGCTGATAGTCAAGTGGTGGAGTCGATCCTTCAGAACGAGAAGGAACGCCTGAAGATCAACGAGGGCATAATGTCACTGCTGCTAAAACTTGACGCAATTCAGGGTGTGAATTCATTTGTGAGGGAATCAAGGAAAGCGGTAATTCGTGAGCTTGTTAATCTGCAAGAAATGGTAGATGTCATATTAGGTGGCAAATCGATAAGAGGGGGAGGTTCGCCGGGTGTAGAAGATGCGGAGGATTTGCATGGGCGGGGTCCCAGTGAAGAAGGTATAAAGGATGAAGGGTTGCCAGATGGTGTCAACTTAGCCGTGGCCTCTGCGCATGATTCAAATGTGCAAGAAGAGGGATCCGTTATTTCTGATAGAATTGAAATTGAGGCCCCAAATCATACTGAGGGTATTTCCATGGTCACAGGCAGTAGTAGTGGGGAAGTGTCATCAGAGGTAATTGCATCAAAGGAAAACACGGTTCAGGAGCAGGAAGTGGGGGATGATTCAGAGGTGCAAGAAGAGGGATCCGTTCATCCTGTTAAAAGTGAAACACAGACTATGCAAATTGAGCCCCCTAACCATACTGAGGATATTTTCATTGTCATGGGAAGTGGCGAAGAGGCATCAGAAGTAGTTGCATCGAATGAAAACAAGGTTCAGGATCAGGAGTTGGAATCATATGATGAGGATGCAAAGAGAGATTCAATTGACGAAGACAAAGCTACGTATGGCGCTTTAAGTTCTGAAGGGCAGAGTCGGGAGGAGTTGAGAGCTTCGGAATCTCAAAGCGTCCCCTTCACAAATGAAGAGATTATCGGATTTGAAGAAAACATATGTGCAAACAGTGCAGATTGTGAAGTACAGACATACAGGGGGTTGAATGATTTGGATCTGTCAAAATCACAAGCGGAGACAAATGAAGTCGCTGAACAGCATGGAGAGGGTGAAGGCATGGACTGTGAAGAGACTCAGAAGGTAATAGGTACAGGAGCGGGGGAAAATACTAATGTTGAAGAAGGCATTGTGAAGGTGCGAGATGAGAACGAGAGATTGAAGAAGATGGTGGCTGATCTGTTCAACAAAACTGAAATGCAGAATCAGTTGATTAATACCCTGAGCTTGAGAATTGCACAGCTAGAGGAACAAATATCCAATAAAAGGAAGAAATCTGGATACAAAAACAAAACAAAAAACCCCAGCAACGGTATCACTCGCAGACGGAATAATGGGGAGGAGGATAAAAGTCAGTAA___ATACCCGCGACGTATTTCCAGTGAAAATGTAGAGCATATAACATGCATATAATTGTTATGCATATAATATCCCCGCTGTATGTTTGAAATAAAAAAGTTTTGTATATTCCATTGGATGTAATGAAAGGGTTTTAATGCAATAAGTTTCTAAATATACAAATTCTGTTTCAATTTTTGCAAGTTTTG

Fln Alignment:

Contig796___PKKVVSIPI---DSETRVSSSGIKKVAVPLLDEASAAKKIQSSFRGFSARKGAPLKKLRVIRDVKAKAEDIRRRLADSQVVESILQNEKERLKINEGIMSLLLKLDAIQGVNSFVRESRKAVIRELVNLQEMVDVILXXXXXXXXXXXXVEDAEDLHGRGPSEEG----IKDEGLPDGV-------------------------NLAVASAHDSNVQEEGSVISDRIEIEAPNHTEGISMVTXXXXXXXXXXXIASKE--NTVQEQEVGDDSEV--------------QEEGSVHPVKSETQTMQIEPPNHTEDIFIVMGSGEEASEVVASNENKVQDQELESYDEDAKRDSIDEDKATYGALSSEGQSREELRASESQSVPFTNEEIIGFEENIC-ANSADCEVQTYRGLNDLDLSKSQAET----------NEVAEQHGEGEGMDCEETQKVIGTGAGENTNVEEGIVKVRDENERLKKMVADLFNKTEMQNQLINTLSLRIAQLE-----EQISNKRKK
B9GZD2_____________PKKVVSIPVRYVGSERSRSESAIK---------------IQKVFRGFLVRKS-----MKKILATKRQVDEIEKRILMKETVELMRRDQKEKLKINEMLMSLLLKLDSVRGVDSGVRDCRKAVIKKAIALQETVDSIAAAANGDDSVVSAGEKGVDETGEGEEENGSVANAADE-LQNGAAESEAVVSMLADSRETREEFNGALENVDMASEGERNVECDGDVPTSMSDY--CDSVRGVDSGVGDCREAVIKKAIALQETVDSIAAAANGDDSVVSAGEKGVDETGEGEEEDGSVANAADELQNGAAE----SEAVVSVLADSREARE-----EFNGTLENVDMASEGERKVECDGDVPT---LMSDYCEPERVLEVVNETVELKEAE---NDETACQGEDRDLEKQVDKDGDCMGTSQTESQSDSSASLMEGDDEEEEEHSGGVEIEKKGDEGEVKSNDESTRRGKELLERMMEDNERMMGLMAELFERNEMQTRLLSSLSQRVEQLERAYICDQLRRRKKK

SNPs (tot: 26)

Position	A %	C %	G %	T %	Probability
413		16		83	0.994512
415		50	50		1.0
469	12	75			0.975346
472		75	12		0.975346
476		75		12	0.975346
480	87			12	0.992554
481	87	12			0.992554
483	87	12			0.992554
485		12		87	0.992554
486	12	87			0.992554
791	80			20	0.995493
871	83		16		0.994512
883	66	33			1.0
941		60		40	1.0
1025	12		87		0.992554
1027		87	12		0.992554
1028	87		12		0.992554
1029			12	87	0.992554
1152	10	90			0.90298
1153	10	90			0.90298
1154		90	10		0.90298
1155	10	90			0.90298
1199	90			10	0.90298
1457		5	84		0.999846
1591			87	12	0.992554
1701		5		94	0.998397

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain