UniGene Name: sp_v3.0_unigene80383
Length: 202 nt
UniGene Fasta |
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>sp_v3.0_unigene80383
G |
Ace file of the UniGene sp_v3.0_unigene80383 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY | - | - | 9.0e-15 | 100% |
FL-Next | sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 96% |
Sma3 | Glutamine synthetase | - | - | 0.0 | - |
Source | ECs | Term | Type | e value | Identity |
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Sma3 | Glutamate--ammonia ligase. | EC:6.3.1.2 | - | 0.0 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Alanine, aspartate and glutamate metabolism | 00250 | 0.0 | % | |
Sma3 | Arginine and proline metabolism | 00330 | 0.0 | % | |
Sma3 | Nitrogen metabolism | 00910 | 0.0 | % | |
Sma3 | Metabolic pathways | 01100 | 0.0 | % |
Source | Gene names |
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Sma3 | AT1G66200; AT5G35630; At1g66200; At3g17820; At5g16570; At5g35630; At5g37600; CsGS1; F15E12.14; GLN; GLN1; GLN1-1; GLN1-2; GLN1-3; GLN1-4; GLN2; GLN4; GLN5; GLN6; GNL1; GNL2; GS; GS-2; GS1; GS1-1; GS1-2; GS1-3; GS1-4; GS1-5; GS1.a; GS1.b; GS1_1; GS1b; GS2; |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | cell wall | GO:0005618 | Cellular Component | 0.0 | - |
Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | mitochondrion | GO:0005739 | Cellular Component | 0.0 | - |
Sma3 | vacuole | GO:0005773 | Cellular Component | 0.0 | - |
Sma3 | cytosol | GO:0005829 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | chloroplast thylakoid membrane | GO:0009535 | Cellular Component | 0.0 | - |
Sma3 | chloroplast stroma | GO:0009570 | Cellular Component | 0.0 | - |
Sma3 | chloroplast envelope | GO:0009941 | Cellular Component | 0.0 | - |
Sma3 | cytosolic ribosome | GO:0022626 | Cellular Component | 0.0 | - |
Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
Sma3 | glutamate-ammonia ligase activity | GO:0004356 | Molecular Function | 0.0 | - |
Sma3 | copper ion binding | GO:0005507 | Molecular Function | 0.0 | - |
Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
Sma3 | glutamine biosynthetic process | GO:0006542 | Biological Process | 0.0 | - |
Sma3 | aging | GO:0007568 | Biological Process | 0.0 | - |
Sma3 | nitrogen fixation | GO:0009399 | Biological Process | 0.0 | - |
Sma3 | response to salt stress | GO:0009651 | Biological Process | 0.0 | - |
Sma3 | ammonia assimilation cycle | GO:0019676 | Biological Process | 0.0 | - |
Sma3 | nitrate assimilation | GO:0042128 | Biological Process | 0.0 | - |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Glutamine synthetase, catalytic domain | IPR008146 | - | 0.0 | - |
Sma3 | Glutamine synthetase, beta-Grasp | IPR008147 | - | 0.0 | - |
Sma3 | Glutamine synthetase/guanido kinase, catalytic domain | IPR014746 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT5G37600.1 | " ATGSR1, GLN1;1, GSR 1, ATGLN1;1 glutamine synthase clone R1 chr5:14933574-14935656 REVERSE LENGTH=356" | 2.0e-15 | 92% |
RefSeq | Arabidopsis thaliana | NP_198576.1 | glutamine synthetase cytosolic isozyme 1-1 [Arabidopsis thaliana] | 3.0e-15 | 92% |
RefSeq | Populus trichocarpa | XP_002301683.1 | predicted protein [Populus trichocarpa] | 1.0e-15 | 100% |
Full-Lengther Next Prediction |
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Fln status: Misassembled
Fln database: coniferopsida.fasta
Fln subject: C0PR48
Fln msg: Coding sequence with some errors, ERROR#1, contains sense and antisense hits!!!, putative chimeric sequence,
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain