SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene26096

Length: 963 nt

Origin of reads: Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene26096

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	casein kinase [Beta vulgaris]	-	-	3.0e-12	35%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	91%
Blast2go	casein kinase i isoform delta-like protein	-	-	0.0	55%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
274		60		40	1.0
425	80		20		0.995493
528		20		80	0.995493
529		20		80	0.995493
596	80	20			0.995493
597			20	80	0.995493
599			20	80	0.995493
601	80	20			0.995493
602	80	20			0.995493
606			60	40	1.0
611			40	60	1.0
613		20		80	0.995493
622	80	20			0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain