SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene24962

Length: 1451 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene24962

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Os11g0216300 protein (Fragment) n=3 Tax=Oryza sativa RepID=Q0ITU3_ORYSJ	-	-	88%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	38%
Blast2go	uncharacterized aarf domain-containing protein kinase chloroplastic-like	-	-	91%

Source	GOs	Term	Type	e value	Identity
Blast2go	plastoglobule	GO:0010287	Cellular Component	0.0	91%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	ABC-1	IPR004147	-	-
Sma3	Cation/H+ exchanger	IPR006153	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLY2

Fln msg: Distance to subject end: 158 aas, W1: There is no M at the beginning, your sequence is shorter than subject: 335 - 442

Fln protein: TYHIQGPFPFRTLASFLNGISLEKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPRVYKELSGSRVLVMEWIDGIRCTDPQAIKEVGIRIPDFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAPGTDVTPIIPALEAIWQNSVGKGLADFNFRIVTEKFNKLVYQYPIRIPERFSLVIRSLLTQEGICFTLQPDFKFLEVAYPYVAKRLLTDPDPALRERLIQVLFKDGVFQWKRLENLIILAKEQVAIMSRNPALQEASRQDTGNRRVDI

Protein Length: 336

Fln nts: GGCTCAAGAGGGGCAGTATTCTCACTTTTTGGTCGTGGAGTAGAGATCCTCTCGAAACTAGGGCTATATTGGATCACCCTTTTCTATGATCGACTTGTTGGGAGGGGTCTAGAGATAGTTCCATTACGTGCAGAGCAACTTCGGAATTTGCTATGTGATTTGGGACCTTCTTTTATCAAAGCTGGCCAGGTTTTGGCAAACAGACCTGATATTGTTCGTGAAGATTATATGAATGAACTTTGCATTCTCCAAGATGATGTTCCTTCATTTCCAAATAAGATTGCTTTTACAATCATAGAAGAAGAGGCCGGTGTACCTCTTGAACAGATATTTAGCAAAATATCTTCTCAGACTATAGCAGCAGCAAGTTTAGGACAGGTTTATCGTGCCACTCTTCGTGGCTCAGTCGAAGAGGTTGCTATAAAGGTACAGAGGCCAGAAATTGAACCTATCATATACAGGGACCTTTTCCTTTTCGAACTCTAGCTTCATTTCTGAATGGCATTAGTCTTGAGAAGCTTGGTTGTAATGCGGAGCTTATTGTTGATGAATTTGGCGAGAAGCTACTTGAAGAGCTTGACTATACACTTGAGGCACGTAACATTGAGGACTTCTTGGAGAACTTCAAAGATGATCCAACAGTTAAGATTCCTCGAGTATACAAAGAACTTTCTGGTTCACGGGTTCTTGTGATGGAATGGATTGATGGCATCCGTTGCACTGATCCACAAGCTATTAAAGAAGTTGGCATCCGCATACCTGATTTTCTCACTGTTGGTGTGAGTGCTGCTCTGAGACAGCTGCTAGAATTTGGGTTGTTTCATGGAGATCCACATCCTGGGAACATCTTTGCCATGCGTGATGGACGTATTGCATATGTAGACTTTGGAAATGTTGCAGTTCTTAGTCAGCAAAACAAACAAATCCTGATTGATGCAGTGGTACATGCTGTGAATGAGGACTATGCGGAGATGGCAAATGATTTTACAAGACTGGGTTTCCTTGCTCCTGGCACTGACGTAACTCCTATTATTCCAGCATTAGAAGCAATATGGCAGAACTCAGTTGGGAAAGGACTCGCTGATTTTAATTTTAGGATCGTCACTGAGAAATTTAACAAACTTGTATACCAGTATCCAATCCGTATTCCTGAAAGGTTTTCTCTTGTTATTCGATCATTATTGACTCAAGAAGGAATTTGTTTCACTCTTCAACCAGACTTCAAGTTTCTTGAGGTAGCTTACCCATATGTGGCGAAACGTCTCCTGACAGACCCAGATCCAGCATTACGAGAGCGCCTCATTCAGGTGCTTTTTAAAGACGGAGTATTTCAATGGAAACGCTTAGAAAATCTGATTATATTGGCTAAGGAACAGGTAGCCATTATGAGTCGGAATCCAGCACTGCAAGAAGCAAGCAGACAAGATACAGGAAATCGGCGAGTTGACATT

Fln Alignment:

Contig24962___LDYTLEARNIEDFLENFKDDPTVKIPRVYKELSGSRVLVMEWIDGIRCTDPQAIKEVGIRIPDFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAPGTDVTPIIPALEAIWQNSVGKGLADFNFRIVTEKFNKLVYQYPIRIPERFSLVIRSLLTQEGICFTLQPDFKFLEVAYPYVAKRLLTDPDPALRERLIQVLFKDGVFQWKRLENLI
B8LLY2_______________MDYEAEAQNGLKFRKLFGQLPEVVIPEMYLDISSRRVLIMEWVEGQKLSE---VKDLHL-----VEVGLYCSLTQLLESGFYHADPHPGNLLRTYDGKLAYIDFGMMGEFKQDFRDGLIEACLHLVNREFDALAGDFVTLGLLPPTAQMSDVANALTGVFQNAVTKGIQNISFGDLSGNLGRTMYKFKFQIPSYFSLVIRSLAVLEGLALSSDPNYKVLGSSYPWIARKVLTDSSPQLRSTLQALLYKDGTFRIDRLESLI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain