SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene24023

Length: 751 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene24023

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glyco_hydro_16 multi-domain protein	-	-	2.0e-29	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	78%
Blast2go	xyloglucan endotransglucosylase hydrolase protein	-	-	0.0	73%

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 16	IPR000757	-	-
Sma3	Glycoside hydrolase, family 16, active site	IPR008263	-	-
Sma3	Beta-glucanase	IPR008264	-	-
Sma3	Xyloglucan endo-transglycosylase, C-terminal	IPR010713	-	-
Sma3	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	-
Sma3	Xyloglucan endotransglucosylase/hydrolase	IPR016455	-	-
Sma3	Carbohydrate kinase, FGGY, conserved site	IPR018483	-	-
Sma3	DNA topoisomerase, type IIA, conserved site	IPR018522	-	-

Full-Lengther Next Prediction

SNPs (tot: 64)

Position	A %	C %	G %	T %	Probability
59	33		66		0.997452
60	33	33		33	0.997753
61			66	33	0.997452
64		33	33		0.997753
66	66			33	0.997452
67	66			33	0.997452
68			33	66	0.997452
69			33	66	0.997452
72	66		33		0.997452
74		33		66	0.997452
75	33			66	0.997452
76		33	66		0.997452
79	33		66		0.997452
116	33		66		0.997452
120			14	85	0.993533
121			85	14	0.993533
127		85		14	0.993533
128	85			14	0.993533
129	85		14		0.993533
130	85		14		0.993533
132		85		14	0.993533
133	85	14			0.993533
135	85	14			0.993533
143	85	14			0.993533
184	88	11			0.923564
186	88	11			0.923564
187	88		11		0.923564
188	88			11	0.923564
191		11	88		0.923564
192		88		11	0.923564
196		11	88		0.923564
198	88		11		0.923564
199	88			11	0.923564
204		11		88	0.923564
206		11		88	0.923564
207	11	88			0.923564
263		88		11	0.923564
285	88		11		0.923564
288	88		11		0.923564
289	88			11	0.923564
292		11	77		0.968132
296		90		10	0.90298
297			10	90	0.90298
298			90	10	0.90298
300	90			10	0.90298
301		10	90		0.90298
302		10		90	0.90298
304	77	11		11	0.968132
305	88		11		0.923564
306		11	88		0.923564
307		85		14	0.993533
309		85	14		0.993533
310	14	71		14	0.984337
312	14	85			0.993533
313		14		85	0.993533
315		14		85	0.993533
316	14		85		0.993533
325			14	85	0.993533
512			64	35	1.0
533	35		64		1.0
544			29	70	1.0
559		64		35	1.0
575		82		17	1.0
583		71		28	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain