SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene14945

Length: 927 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene14945

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Dirigent-like protein n=1 Tax=Tsuga heterophylla RepID=Q9SDQ7_TSUHE	-	-	72%
FL-Next	tr=Dirigent-like protein; Tsuga heterophylla (Western hemlock) (Abies heterophylla).	-	-	72%
Blast2go	dirigent-like protein	-	-	81%

Source	InterPros	Term	Type	e value	Identity
Sma3	Plant disease resistance response protein	IPR004265	-	0.0	-
Sma3	Bacterial extracellular solute-binding family 1, conserved site	IPR006061	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
99		50	50		1.0
119	50		50		1.0
202		75		25	0.996473
213	25		75		0.996473
293	25	75			0.996473
299	25		75		0.996473
301	50		50		1.0
325	33		66		0.997452
501			14	85	0.993533
546	85		14		0.993533
570	12		87		0.992554
578	87		12		0.992554
614		14		71	0.984337
708		11		88	0.923564
720	90		10		0.90298
721			10	90	0.90298
741		22		77	0.999999
825		40		60	1.0
850		50		25	0.995533
863		66	33		0.997452
864		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain