SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene14219

Length: 565 nt

Origin of reads: Uma v2

UniGene Fasta

>sp_v2.0_unigene14219
AAGGTTTCGAGATATATAGTGTTGCTATATAATTGTTTGAGAATGGGATTCATGAGAAGCGTTAGAATAGCGTTCCCACAATTCATGTCAAGGTTCTGGTCATTCTTTGCACTTCTGTGTAGCCCAAGGGCAAGGCTGCCAGGCCAATCCCCGGATGGCAGAGAGGCAGTCCTGCTAAACTATGTTCTAAAAAATTCAGAGAAGGGAAATGCAGAGTCTGTGCTGAGTGCCATTGAGAGTCATGCTCAGCAATCTTGGCTGACGAATTTAGGCAAGGAGAAGAGCTCTGTGCTAGATGGTGCAGTGCAGAAATTTGATCCCAAAGTGGTCTTAGAGCTTGGAACTTACTGTGGCTATTCTGCCATAAGAATTGCCTCCAAGATGACAAAGCCAGACAGCAAGCTGGTCTCTATAGAAAAGAATCCACAGAATTGTAGTGTTGCCAGAGCAATTATTGAACATGCAGGTCTGTCATCAAAGGCGAAGGTGATGGAAGGAACACTGGGTAGCAATTTGGAGGAACTGGATGAAATTTTAGAAGACGAGAGAGTTCCATACTTTGAAT

Ace file of the UniGene sp_v2.0_unigene14219

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cathechol O-methyltransferase (Fragment) n=5 Tax=Pinus RepID=B0ZR48_PINTA	-	-	6.0e-26	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	58%
Blast2go	cathechol o-methyltransferase	-	-	0.0	68%

Source	ECs	Term	Type	e value	Identity
Blast2go	Catechol O-methyltransferase.	EC:2.1.1.6	-	0.0	68%

Source	KEGGs	Term	Identity
Blast2go	Steroid hormone biosynthesis	00140	68%
Blast2go	Tyrosine metabolism	00350	68%
Blast2go	Betalain biosynthesis	00965	68%
Blast2go	Metabolic pathways	01100	68%

Source	GOs	Term	Type	Identity
Blast2go	catecholamine metabolic process	GO:0006584	Biological Process	68%
Blast2go	neurotransmitter biosynthetic process	GO:0042136	Biological Process	68%
Blast2go	xenobiotic metabolic process	GO:0006805	Biological Process	68%
Blast2go	primary metabolic process	GO:0044238	Biological Process	68%
Blast2go	methylation	GO:0032259	Biological Process	68%
Blast2go	regulation of cellular process	GO:0050794	Biological Process	68%
Blast2go	catechol O-methyltransferase activity	GO:0016206	Molecular Function	68%
Blast2go	protein binding	GO:0005515	Molecular Function	68%
Blast2go	intracellular membrane-bounded organelle	GO:0043231	Cellular Component	68%
Blast2go	microsome	GO:0005792	Cellular Component	68%
Blast2go	cytosol	GO:0005829	Cellular Component	68%
Blast2go	plasma membrane	GO:0005886	Cellular Component	68%

Source	InterPros	Term	Type	e value	Identity
Sma3	O-methyltransferase, family 3	IPR002935	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P099

Fln msg: Distance to subject end: 83 aas, your sequence is shorter than subject: 174 - 248

Fln protein: MGFMRSVRIAFPQFMSRFWSFFALLCSPRARLPGQSPDGREAVLLNYVLKNSEKGNAESVLSAIESHAQQSWLTNLGKEKSSVLDGAVQKFDPKVVLELGTYCGYSAIRIASKMTKPDSKLVSIEKNPQNCSVARAIIEHAGLSSKAKVMEGTLGSNLEELDEILEDERVPYFE

Protein Length: 175

Fln nts: AAGGTTTCGAGATATATAGTGTTGCTATATAATTGTTTGAGA_-_ATGGGATTCATGAGAAGCGTTAGAATAGCGTTCCCACAATTCATGTCAAGGTTCTGGTCATTCTTTGCACTTCTGTGTAGCCCAAGGGCAAGGCTGCCAGGCCAATCCCCGGATGGCAGAGAGGCAGTCCTGCTAAACTATGTTCTAAAAAATTCAGAGAAGGGAAATGCAGAGTCTGTGCTGAGTGCCATTGAGAGTCATGCTCAGCAATCTTGGCTGACGAATTTAGGCAAGGAGAAGAGCTCTGTGCTAGATGGTGCAGTGCAGAAATTTGATCCCAAAGTGGTCTTAGAGCTTGGAACTTACTGTGGCTATTCTGCCATAAGAATTGCCTCCAAGATGACAAAGCCAGACAGCAAGCTGGTCTCTATAGAAAAGAATCCACAGAATTGTAGTGTTGCCAGAGCAATTATTGAACATGCAGGTCTGTCATCAAAGGCGAAGGTGATGGAAGGAACACTGGGTAGCAATTTGGAGGAACTGGATGAAATTTTAGAAGACGAGAGAGTTCCATACTTTGAAT

Fln Alignment:

Contig14219___QFMSRFWSFFALLCSPRARLPGQSPDGREAVLLNYVLKNSEKGNAESVLSAIESHAQQSWLTNLGKEKSSVLDGAVQKFDPKVVLELGTYCGYSAIRIASKMTKPDSKLVSIEKNPQNCSVARAIIEHAGLSSKAKVMEGTLGSNXXXXXXXXXXXRVPYFE
A9P099_______________EFVSKVASYVTFSFDGRARLTGHSSDGRERAVLNYVQQNVQRGNAESVVSAIESFTDRSWMPILGREKGCLLDAAVQKFDPKVALEIGTYCGYSAIRIASKMTKPDSKLICIEMNPHNYAVATAMIEHAGLSSKVIMLRGTLSDLDDSLEEFMIEMTAPYFD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain