SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene13763

Length: 931 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene13763

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RING/U-box domain-containing protein [Arabidopsis thaliana] gb\|AAF79455.1\|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb\|AAL15335.1\| At1g19310/F18O14_14 [Arabidopsis thaliana] gb\|AAM51593.1\| At1g19310/F18O14_14 [Arabidopsis thaliana] gb\|AAM62463.1\| unknow	-	-	3.0e-15	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	46%
Blast2go	protein	-	-	7.41713e-19	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	zinc ion binding	GO:0008270	Molecular Function	7.41713e-19	77%
Blast2go	plastid	GO:0009536	Cellular Component	7.41713e-19	77%

Source	InterPros	Term	Type	Identity
Sma3	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	IPR000194	-	-
Sma3	Zinc finger, RING-type	IPR001841	-	-
Sma3	Zinc finger, RING-type, conserved site	IPR017907	-	-
Sma3	Zinc finger, C3HC4 RING-type	IPR018957	-	-

Full-Lengther Next Prediction

SNPs (tot: 46)

Position	A %	C %	G %	T %	Probability
119		33		66	0.997452
120	66		33		0.997452
122	66	33			0.997452
124			66	33	0.997452
129	66			33	0.997452
130			66	33	0.997452
133		33		66	0.997452
137	66			33	0.997452
141			66	33	0.997452
142	66	33			0.997452
164	66			33	0.997452
292	66	33			0.997452
293			33	66	0.997452
300	33			66	0.997452
302		33	66		0.997452
303	66			33	0.997452
304	66			33	0.997452
307	66	33			0.997452
308	66			33	0.997452
310		33	66		0.997452
312	66	33			0.997452
313	66			33	0.997452
314		33	66		0.997452
316	66		33		0.997452
330	87	12			0.992554
331		12	87		0.992554
332	87			12	0.992554
333			87	12	0.992554
334		87	12		0.992554
338		87	12		0.992554
339		12		87	0.992554
341	12		87		0.992554
342		12	87		0.992554
345	12			87	0.992554
363			11	88	0.923564
367	11			88	0.923564
372			11	88	0.923564
375	88		11		0.923564
376			88	11	0.923564
377		11	88		0.923564
378	11			88	0.923564
379		11		88	0.923564
756	11	88			0.923564
802	83			16	0.994512
803	83	16			0.994512
805	83	16			0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain