SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene13729

Length: 1036 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene13729

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Histidine acid phosphatase [Medicago truncatula]	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	97%
Blast2go	phosphoglycerate mutase-like protein	-	-	82%

Source	ECs	Term	Type	e value	Identity
Blast2go	Acid phosphatase.	EC:3.1.3.2	-	0.0	82%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Aminobenzoate degradation	00627		0.0	82%
Blast2go	Riboflavin metabolism	00740		0.0	82%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	82%
Blast2go	transition metal ion binding	GO:0046914	Molecular Function	82%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	82%
Blast2go	acid phosphatase activity	GO:0003993	Molecular Function	82%
Blast2go	plasma membrane	GO:0005886	Cellular Component	82%

Source	InterPros	Term	Type	Identity
Sma3	Histidine phosphatase superfamily, clade-2	IPR000560	-	-
Sma3	Homeobox protein, antennapedia type, conserved site	IPR001827	-	-
Sma3	ATP-grasp fold	IPR011761	-	-
Sma3	ATP-grasp fold, RimK-type	IPR013651	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6HV78

Fln msg: Overlapping hits, possible frame ERROR between 120 and 114, and overlapping frame ERROR between 657 and 647, Distance to subject end: 207 aas, your sequence is shorter than subject: 346 - 1051

Fln protein: TYTCRKKQAEELGRYFRNNMYPGEGTGLLRLHSTYRHxxxxYSSDEGRVQMSAAAFAKGLLDLEGPLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIITSGGKKSNASVNEESPWMVDATGLPSNARELLPRMAALTKKVTAQVKQLAKDEEEGLAETTSDEALPPYDQAKALGKTNMDVDRIAAGLPCGSEGFLLMFARWKKTGARLVQxxxxxPV*YHTDSRCL*FVQV*PHTQCTFAS*WLG*ALQSDSVACRWSYS**IWH*S*T*TQIGSKIARRLLGKILIDLRNTRQEAINVAELKYSQECSDISSNFGDDECDSAKRCRRMSDDSRNQVNRHW

Protein Length: 347

Fln nts: ACTTACACATGCAGGAAGAAACAGGCTGAAGAGCTCGGGAGATACTTCCGAAACAATATGTATCCAGGAGAAGGCACAGGCTTGCTACGTCTGCATAGTACATATCGCCATxxxxxxxxxxxxTATAGTTCAGATGAGGGCCGTGTACAGATGTCTGCTGCAGCATTTGCAAAGGGTCTTCTGGATCTTGAAGGGCCGTTAACGCCAATTTTGGTTTCTCTTGTGAGCAAAGATTCATCCATGCTTGATGGCCTTGATAACGCCAGCATAGAAATGGAAGAAGCCAAGGCCAGATTGAATGAGATAATAACTTCAGGAGGTAAAAAATCAAACGCTTCAGTTAATGAAGAATCTCCGTGGATGGTTGATGCTACTGGCTTGCCAAGTAATGCGCGTGAACTTCTTCCAAGGATGGCTGCGCTTACAAAGAAAGTAACAGCACAAGTCAAACAACTAGCAAAAGATGAAGAAGAAGGTCTTGCTGAGACAACTTCGGATGAAGCCCTTCCTCCATATGATCAGGCTAAAGCTCTTGGGAAGACGAATATGGATGTTGATCGAATTGCTGCTGGATTACCATGTGGCAGTGAAGGATTCCTCTTAATGTTTGCACGCTGGAAAAAGACTGGAGCGAGACTTGTACAAxxxxxxxxxxxxxxxCCGGTTTGATATCACACAGATTCCAGATGTTTATGATTCGTGCAAGTATGACCTCATACACAATGCACATTTGCATCTTGATGGCTTGGATGAGCTCTTCAAAGTGACTCAGTTGCTTGCAGATGGAGTTATTCCTAATGAATATGGCATTAATCCTAAACATAAACTCAAATTGGGTCAAAGATTGCACGCCGATTGCTTGGAAAGATATTGATTGATCTTCGAAACACTCGCCAAGAAGCCATTAATGTTGCAGAACTGAAGTATTCTCAAGAATGCTCTGACATATCTTCTAATTTTGGTGATGATGAATGTGATTCTGCGAAGAGATGTAGGAGAATGTCTGATGATTCAAGAAATCAAGTGAACAGGCATTGGA

Fln Alignment:

Contig13729___KKQAEELGRYFRNNMYPGEGTGLLRLHSTYRHDxxIYSSDEGRVQMSAAAFAKGLLDLEGPLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIITSGGKKSNASVNEESPWMVDATGLPSNARELLPRMAALTKKVTAQVKQLAKDEEEGLAETTSDEALPPYDQAKALGKTNMDVDRIAAGLPCGSEGFLLMFAxxxxRFDITQIPDVYDSCKYDLIHNAHLHLDGLDELFKVTQLLADGVIPNEYGINPKHKLKLGQRL
F6HV78_______________RKQAEELGRYFRNNMYPGEGTGLLRLHSTYRHDxxIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEEAKARLNEIITSGAK-NHTNGSSDVPWMTDGGGLPSNASELLPKLVKLTKKVTEQVRLLAKDEDENLSVTSSYDVIPPYDEAKALGKTNIDVDRIAAGLPCGSEGFLLMFAxxxxRFDITQIPDVYDSCKYDLLHNAHLNLEDLDELFKVAQLLADGVIPNEYGINPKQKLKIGSKI

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
984	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain