SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene12815

Length: 712 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene12815

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Serine-threonine protein kinase n=1 Tax=Triticum aestivum RepID=D2KHX1_WHEAT	-	-	2.0e-14	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	59%
Blast2go	serine threonine-protein kinase pepkr2-like	-	-	2.2136e-22	64%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein kinase activity	GO:0004672	Molecular Function	2.2136e-22	64%
Blast2go	protein binding	GO:0005515	Molecular Function	2.2136e-22	64%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
295	20		80		0.995493
316		40		60	1.0
320	16			83	0.994512
321	16			83	0.994512
322		83		16	0.994512
323		83	16		0.994512
324	83			16	0.994512
412	20			80	0.995493
482		33		66	0.997452
507	25			75	0.996473
509			25	75	0.996473
656	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain