SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene12616

Length: 643 nt

Origin of reads: Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene12616 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	serine/threonine-protein kinase Nek5 [Arabidopsis thaliana] sp\|Q0WPH8.1\|NEK5_ARATH RecName: Full=Serine/threonine-protein kinase Nek5; AltName: Full=NimA-related protein kinase 5; Short=AtNEK6; Short=AtNek5 dbj\|BAF00971.1\| protein kinase like protein [Ara	-	-	4.0e-28	67%
FL-Next	sp=Serine/threonine-protein kinase Nek5; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	82%
Blast2go	serine threonine-protein kinase nek5-like	-	-	1.28603e-34	92%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	1.28603e-34	92%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	1.28603e-34	92%
Blast2go	epidermal cell differentiation	GO:0009913	Biological Process	1.28603e-34	92%
Blast2go	microtubule-based process	GO:0007017	Biological Process	1.28603e-34	92%
Blast2go	DNA integration	GO:0015074	Biological Process	1.28603e-34	92%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	1.28603e-34	92%
Blast2go	DNA binding	GO:0003677	Molecular Function	1.28603e-34	92%
Blast2go	ATP binding	GO:0005524	Molecular Function	1.28603e-34	92%
Blast2go	protein binding	GO:0005515	Molecular Function	1.28603e-34	92%
Blast2go	cortical microtubule	GO:0055028	Cellular Component	1.28603e-34	92%

Source	InterPros	Term	Type	Identity
Sma3	Major intrinsic protein	IPR000425	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Integrase, catalytic core	IPR001584	-	-
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Heat shock protein DnaJ	IPR003095	-	-
Sma3	Retrotransposon gag protein	IPR005162	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3		IPR010847	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
410	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain