SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene12403

Length: 769 nt

Origin of reads: Biogeco1 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene12403

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	receptor-like protein kinase THESEUS 1 [Arabidopsis thaliana] sp\|Q9LK35.1\|THE1_ARATH RecName: Full=Receptor-like protein kinase THESEUS 1; Flags: Precursor dbj\|BAA98098.1\| receptor-protein kinase-like protein [Arabidopsis thaliana] gb\|AED96490.1\| receptor	-	-	2.0e-27	46%
FL-Next	sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	46%
Blast2go	receptor-like protein kinase herk 1-like	-	-	9.60887e-36	65%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein autophosphorylation	GO:0046777	Biological Process	9.60887e-36	65%
Blast2go	regulation of unidimensional cell growth	GO:0051510	Biological Process	9.60887e-36	65%
Blast2go	post-embryonic development	GO:0009791	Biological Process	9.60887e-36	65%
Blast2go	brassinosteroid mediated signaling pathway	GO:0009742	Biological Process	9.60887e-36	65%
Blast2go	protein kinase activity	GO:0004672	Molecular Function	9.60887e-36	65%
Blast2go	plasma membrane	GO:0005886	Cellular Component	9.60887e-36	65%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
89		80	20		0.995493
91	80	20			0.995493
94		80	20		0.995493
99	80			20	0.995493
105	80			20	0.995493
108	80	20			0.995493
109	20			80	0.995493
111	80			20	0.995493
114	20			80	0.995493
462		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain